RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Slc6a18O88576 615 aa16.53■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Abcd4O89016 606 aa16.53■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 GlulP15105 373 aa16.53■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Foxa3P35584 353 aa16.53■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Klf16P58334 251 aa16.53■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Casp3P70677 277 aa16.53■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 HhipQ7TN16 700 aa16.53■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Zfp954Q7TNU5 416 aa16.53■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Neurl3Q8CJC5 254 aa16.53■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Znf768Q8R0T2 568 aa16.53■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Olfr788Q8VFI0 311 aa16.53■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Olfr1423Q8VFV0 310 aa16.53■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Nudt16l1Q8VHN8 211 aaKnown RBP16.53■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Rgs19Q9CX84 216 aa16.53■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Sult1c2Q9D939 296 aa16.53■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Trbv23A0A0A6YWQ1 115 aa16.52■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Vmn1r152E9Q9N3 307 aa16.52■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Vmn1r104L7N293 307 aa16.52■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Rbbp9O88851 186 aa16.52■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Acsf3Q3URE1 583 aa16.52■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 SprQ64105 261 aa16.52■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Spin2cQ6NVE3 257 aa16.52■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Bhlhe23Q8BGW3 223 aa16.52■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Nob1Q8BW10 403 aa16.52■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Akr1c18Q8K023 323 aa16.52■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Syngr3Q8R191 229 aa16.52■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Rab14Q91V41 215 aaKnown RBP16.52■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Lancl2Q9JJK2 450 aa16.52■□□□□ 0.24
Ccdc3-201ENSMUST00000027988 Sult6b2B7ZWN4 290 aa16.52■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Ccr6O54689 367 aa16.52■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Lcn3Q62471 182 aa16.52■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 GcsamQ6RFH4 181 aa16.52■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 SheQ8BSD5 492 aa16.52■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Lrp12Q8BUJ9 858 aa16.52■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 PigtQ8BXQ2 582 aa16.52■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Olfr584Q8VGW0 319 aa16.52■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Emc4Q9CZX9 183 aa16.52■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Reep6Q9JM62 201 aa16.52■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Mllt6B1AR10 1109 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Scml2B1AVB3 969 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Pip5k1cO70161 661 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Pou2f1P25425 770 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Cxcl5P50228 132 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 RoraP51448 523 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Mex3dQ3UE17 643 aaKnown RBP16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Znf629Q6A085 867 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 CyrenQ8BHZ5 157 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Acot4Q8BWN8 421 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Pom121Q8K3Z9 1200 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Lin37Q9D8N6 246 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Plxdc2Q9DC11 530 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Insl6Q9QY05 191 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Trav12-2A0N8N6 114 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Prdm13E9PZZ1 754 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Rab11bP46638 218 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Hormad2Q5SQP1 306 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Fbxw22Q5XG67 466 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Med16Q6PGF3 828 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Cggbp1Q8BHG9 167 aaKnown RBP16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Seh1lQ8R2U0 360 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Olfr1497Q8VG11 314 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Olfr351Q8VGK1 310 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Tmem138Q9D6G5 162 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Mfsd4b2Q9D8I5 366 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Cts8Q9JI81 333 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Nkain4Q9JMG4 208 aa16.51■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Rpl27P61358 136 aaKnown RBP16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Lin54Q571G4 749 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Slc35d3Q8BGF8 422 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Pqlc2Q8C4N4 293 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Tmed4Q8R1V4 227 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Tspan32Q9JHH2 256 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 AspmQ8CJ27 3122 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Gm13723A0A1L1SUP2 315 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Vmn2r16E9Q025 850 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Gm21411J3KMS0 136 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 SparcP07214 302 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Cox4i1P19783 169 aaKnown RBP16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 GipP48756 144 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Gm1123Q1RME4 390 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 DhpsQ3TXU5 369 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Slc25a33Q3TZX3 320 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Tmem164Q6PHN7 296 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 NagpaQ8BJ48 517 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Rell2Q8BRJ3 303 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Ocel1Q8VCR9 219 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Zfand2bQ91X58 257 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 MrgprgQ91ZB5 289 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Mrgpra8Q91ZC4 305 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Slco1a6Q99J94 670 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Eif2b1Q99LC8 305 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Ubqln4Q99NB8 596 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Slc24a3Q99PD7 645 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Cdc40Q9DC48 579 aaKnown RBP16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Nudt22Q9DD16 308 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 BvesQ9ES83 358 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Calm4Q9JM83 148 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 MthfrQ9WU20 654 aa16.5■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 4931422A03RikA2BHN9 113 aa16.49■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Cxcl12P40224 93 aa16.49■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms