RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 ZNF799Q96GE5 643 aa15.35■□□□□ 0.05
PHGDH-232ENST00000641947 LYZL4Q96KX0 146 aa15.35■□□□□ 0.05
PHGDH-232ENST00000641947 SDHCQ99643 169 aaPredicted RBP15.35■□□□□ 0.05
PHGDH-232ENST00000641947 TCF7L1Q9HCS4 588 aa15.35■□□□□ 0.05
PHGDH-232ENST00000641947 GPR84Q9NQS5 396 aa15.35■□□□□ 0.05
PHGDH-232ENST00000641947 RP1L1Q8IWN7 2480 aaPredicted RBP15.35■□□□□ 0.05
PHGDH-232ENST00000641947 A6NIN4 97 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 FARS2O95363 451 aaKnown RBP15.34■□□□□ 0.05
PHGDH-232ENST00000641947 IGLV3-1P01715 115 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 TPOP07202 933 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 ABOP16442 354 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 HTR5AP47898 357 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 SLC6A9P48067 706 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 MADCAM1Q13477 382 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 SNAI3Q3KNW1 292 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 HIKESHIQ53FT3 197 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 PABPC1L2AQ5JQF8 200 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 HES5Q5TA89 166 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 DDI2Q5TDH0 399 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 CD163Q86VB7 1156 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 CNEP1R1Q8N9A8 125 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 OR1K1Q8NGR3 316 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 OR1J2Q8NGS2 313 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 OR5H6Q8NGV6 325 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 ADAT3Q96EY9 351 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-232ENST00000641947 MBD3L4A6NDZ8 208 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-232ENST00000641947 MBD3L3A6NE82 208 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-232ENST00000641947 MBD3L5A6NJ08 208 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-232ENST00000641947 SYT7O43581 403 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 TNFSF13O75888 250 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 SNRPBP14678 240 aaKnown RBP15.34■□□□□ 0.05
PHGDH-232ENST00000641947 CCL1P22362 96 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 APEX1P27695 318 aaKnown RBP15.34■□□□□ 0.05
PHGDH-232ENST00000641947 MPGP29372 298 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 PCBD1P61457 104 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 ZNF79Q15937 498 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 GFOD2Q3B7J2 385 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 ABHD12BQ7Z5M8 362 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-232ENST00000641947 NAXEQ8NCW5 288 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 OR51A2Q8NGJ7 313 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 MBD3L2Q8NHZ7 208 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-232ENST00000641947 PGAM5Q96HS1 289 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 CEP19Q96LK0 163 aa15.34■□□□□ 0.05
PHGDH-232ENST00000641947 NKX3-1Q99801 234 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-232ENST00000641947 ZNF275Q9NSD4 429 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-232ENST00000641947 IFITM5A6NNB3 132 aa15.33■□□□□ 0.04
PHGDH-232ENST00000641947 FSTP19883 344 aa15.33■□□□□ 0.04
PHGDH-232ENST00000641947 IGHV1-2P23083 117 aa15.33■□□□□ 0.04
PHGDH-232ENST00000641947 CD40LGP29965 261 aa15.33■□□□□ 0.04
PHGDH-232ENST00000641947 KRTCAP3Q53RY4 240 aa15.33■□□□□ 0.04
PHGDH-232ENST00000641947 C3P1Q6ZMU1 363 aa15.33■□□□□ 0.04
PHGDH-232ENST00000641947 CROCCP3Q8IVE0 287 aa15.33■□□□□ 0.04
PHGDH-232ENST00000641947 TRMT10AQ8TBZ6 339 aaKnown RBP15.33■□□□□ 0.04
PHGDH-232ENST00000641947 ZCCHC14Q8WYQ9 949 aaKnown RBP15.33■□□□□ 0.04
PHGDH-232ENST00000641947 BCL2L2Q92843 193 aaPredicted RBP15.33■□□□□ 0.04
PHGDH-232ENST00000641947 SPTSSAQ969W0 71 aa15.33■□□□□ 0.04
PHGDH-232ENST00000641947 KCTD12Q96CX2 325 aaKnown RBP15.33■□□□□ 0.04
PHGDH-232ENST00000641947 OCEL1Q9H607 264 aa15.33■□□□□ 0.04
PHGDH-232ENST00000641947 V9GY05 133 aa15.33■□□□□ 0.04
PHGDH-232ENST00000641947 ATRXP46100 2492 aa15.33■□□□□ 0.04
PHGDH-232ENST00000641947 PRR14LQ5THK1 2151 aa15.32■□□□□ 0.04
PHGDH-232ENST00000641947 AIPO00170 330 aa15.32■□□□□ 0.04
PHGDH-232ENST00000641947 PDCD5O14737 125 aa15.32■□□□□ 0.04
PHGDH-232ENST00000641947 PPP5CP53041 499 aa15.32■□□□□ 0.04
PHGDH-232ENST00000641947 CLDN12P56749 244 aa15.32■□□□□ 0.04
PHGDH-232ENST00000641947 PPP3R1P63098 170 aa15.32■□□□□ 0.04
PHGDH-232ENST00000641947 ZNF45Q02386 682 aa15.32■□□□□ 0.04
PHGDH-232ENST00000641947 ECH1Q13011 328 aa15.32■□□□□ 0.04
PHGDH-232ENST00000641947 SPANXN2Q5MJ10 180 aa15.32■□□□□ 0.04
PHGDH-232ENST00000641947 FAM57AQ8TBR7 257 aa15.32■□□□□ 0.04
PHGDH-232ENST00000641947 ACOT12Q8WYK0 555 aa15.32■□□□□ 0.04
PHGDH-232ENST00000641947 THRSPQ92748 146 aa15.32■□□□□ 0.04
PHGDH-232ENST00000641947 FGGYQ96C11 551 aa15.32■□□□□ 0.04
PHGDH-232ENST00000641947 SNRNP40Q96DI7 357 aaKnown RBP15.32■□□□□ 0.04
PHGDH-232ENST00000641947 FAM71F1Q96KD3 344 aaPredicted RBP15.32■□□□□ 0.04
PHGDH-232ENST00000641947 SLX1AQ9BQ83 275 aa15.32■□□□□ 0.04
PHGDH-232ENST00000641947 SLITRK2Q9H156 845 aa15.32■□□□□ 0.04
PHGDH-232ENST00000641947 B3GNT2Q9NY97 397 aa15.32■□□□□ 0.04
PHGDH-232ENST00000641947 LOC100509620A0A075B734 347 aa15.31■□□□□ 0.04
PHGDH-232ENST00000641947 A0A1B0GVI7 797 aa15.31■□□□□ 0.04
PHGDH-232ENST00000641947 CD2P06729 351 aa15.31■□□□□ 0.04
PHGDH-232ENST00000641947 EIF4EP06730 217 aaKnown RBP15.31■□□□□ 0.04
PHGDH-232ENST00000641947 ELK1P19419 428 aa15.31■□□□□ 0.04
PHGDH-232ENST00000641947 SLC36A2Q495M3 483 aa15.31■□□□□ 0.04
PHGDH-232ENST00000641947 C1orf185Q5T7R7 199 aa15.31■□□□□ 0.04
PHGDH-232ENST00000641947 OR2A2Q6IF42 318 aa15.31■□□□□ 0.04
PHGDH-232ENST00000641947 C16orf87Q6PH81 154 aa15.31■□□□□ 0.04
PHGDH-232ENST00000641947 CNIH2Q6PI25 160 aa15.31■□□□□ 0.04
PHGDH-232ENST00000641947 LUZP2Q86TE4 346 aa15.31■□□□□ 0.04
PHGDH-232ENST00000641947 OR6K3Q8NGY3 331 aa15.31■□□□□ 0.04
PHGDH-232ENST00000641947 FAM122AQ96E09 287 aa15.31■□□□□ 0.04
PHGDH-232ENST00000641947 DIRAS2Q96HU8 199 aa15.31■□□□□ 0.04
PHGDH-232ENST00000641947 WACQ9BTA9 647 aa15.31■□□□□ 0.04
PHGDH-232ENST00000641947 RNF121Q9H920 327 aa15.31■□□□□ 0.04
PHGDH-232ENST00000641947 FOXJ3Q9UPW0 622 aa15.31■□□□□ 0.04
PHGDH-232ENST00000641947 ARPC4-TTLL3A0A0A6YYG9 625 aa15.31■□□□□ 0.04
PHGDH-232ENST00000641947 A0A0U1RQV5 110 aa15.31■□□□□ 0.04
PHGDH-232ENST00000641947 MED19A0JLT2 244 aaPredicted RBP15.31■□□□□ 0.04
PHGDH-232ENST00000641947 TBX1O43435 398 aa15.31■□□□□ 0.04
PHGDH-232ENST00000641947 WDR1O75083 606 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms