RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 ZNF511Q8NB15 262 aa14.15□□□□□ -0.14
CACNA1A-259ENST00000638114 OR10S1Q8NGN2 331 aa14.15□□□□□ -0.14
CACNA1A-259ENST00000638114 OR6K6Q8NGW6 343 aa14.15□□□□□ -0.14
CACNA1A-259ENST00000638114 OR13G1Q8NGZ3 307 aa14.15□□□□□ -0.14
CACNA1A-259ENST00000638114 SPTSSAQ969W0 71 aa14.15□□□□□ -0.14
CACNA1A-259ENST00000638114 ZNF799Q96GE5 643 aa14.15□□□□□ -0.14
CACNA1A-259ENST00000638114 ARRDC5A6NEK1 342 aa14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 E2F6O75461 281 aa14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 PNPP00491 289 aa14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 IGHV2-70P01814 119 aa14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 CLUP10909 449 aa14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 PSKH1P11801 424 aa14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 ZNF3P17036 446 aa14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 ENTPD1P49961 510 aa14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 GK2Q14410 553 aaPredicted RBP14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 IQCF1Q8N6M8 205 aa14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 ST7LQ8TDW4 575 aa14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 OTULINQ96BN8 352 aa14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 MEGF10Q96KG7 1140 aa14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 SLC30A2Q9BRI3 323 aa14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 COPS4Q9BT78 406 aa14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 NMNAT2Q9BZQ4 307 aa14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 METTL17Q9H7H0 456 aaPredicted RBP14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 CMC2Q9NRP2 79 aa14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 DDX28Q9NUL7 540 aaKnown RBP14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 PDP1Q9P0J1 537 aaPredicted RBP14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 PCDHB10Q9UN67 800 aa14.14□□□□□ -0.15
CACNA1A-259ENST00000638114 A0A0G2JMP0 313 aa14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 A0A0X1KG70 313 aa14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 H0YL77 283 aa14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 HOXB6P17509 224 aaKnown RBP14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 POU1F1P28069 291 aa14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 GRK5P34947 590 aa14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 SRP9P49458 86 aaKnown RBP14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 TAF13Q15543 124 aa14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 KRTAP24-1Q3LI83 254 aa14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 PGAP1Q75T13 922 aa14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 MRPL21Q7Z2W9 205 aaKnown RBP14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 TMEM179BQ7Z7N9 219 aa14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 OR4M2Q8NGB6 313 aa14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 SLCO4A1Q96BD0 722 aa14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 SLC7A6OSQ96CW6 309 aaPredicted RBP14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 MED20Q9H944 212 aa14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 G6PC2Q9NQR9 355 aa14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 CENPMQ9NSP4 180 aa14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 TMEM100Q9NV29 134 aa14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 METRNQ9UJH8 293 aa14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 WNK2Q9Y3S1 2297 aa14.13□□□□□ -0.15
CACNA1A-259ENST00000638114 IGHV3-64DA0A0J9YX35 117 aa14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 FAM183AA6NL82 134 aa14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 F5H5P2 479 aa14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 ZNF593O00488 134 aaPredicted RBP14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 MLNRO43193 412 aa14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 DNAJC8O75937 253 aaPredicted RBP14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 MMP16P51512 607 aa14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 BLVRAP53004 296 aa14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 BTG1P62324 171 aa14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 LCN2P80188 198 aa14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 DCAF12L2Q5VW00 463 aa14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 KLHL36Q8N4N3 616 aa14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 SPICQ8N5J4 248 aa14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 RFLNBQ8N5W9 214 aa14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 ZNF420Q8TAQ5 688 aaPredicted RBP14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 SLAMF6Q96DU3 332 aa14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 SIGLEC11Q96RL6 698 aa14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 YY1AP1Q9H869 796 aa14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 ZNF556Q9HAH1 456 aa14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 GCM1Q9NP62 436 aa14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 POMPQ9Y244 141 aa14.12□□□□□ -0.15
CACNA1A-259ENST00000638114 LOC105371242A0A075B767 164 aa14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 TMEM178BH3BS89 294 aa14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 IFNL4K9M1U5 179 aa14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 TCF21O43680 179 aa14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 HLA-DPB1P04440 258 aa14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 OTX1P32242 354 aaPredicted RBP14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 PRKXP51817 358 aa14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 CBX1P83916 185 aa14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 ZMYND11Q15326 602 aa14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 PCK2Q16822 640 aa14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 SNAI3Q3KNW1 292 aa14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 TMEM155Q4W5P6 130 aa14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 TEX30Q5JUR7 227 aa14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 LIPNQ5VXI9 398 aa14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 DRAM2Q6UX65 266 aa14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 SPATC1Q76KD6 591 aa14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 HS3ST5Q8IZT8 346 aa14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 OR6N2Q8NGY6 317 aa14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 SPRYD4Q8WW59 207 aaPredicted RBP14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 OCEL1Q9H607 264 aa14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 N6AMT1Q9Y5N5 214 aa14.11□□□□□ -0.15
CACNA1A-259ENST00000638114 ARHGAP32A7KAX9 2087 aa14.1□□□□□ -0.15
CACNA1A-259ENST00000638114 TCRBV3S1A0A5B6 114 aa14.1□□□□□ -0.15
CACNA1A-259ENST00000638114 ZNF878C9JN71 531 aa14.1□□□□□ -0.15
CACNA1A-259ENST00000638114 FKBP6O75344 327 aa14.1□□□□□ -0.15
CACNA1A-259ENST00000638114 FOXH1O75593 365 aa14.1□□□□□ -0.15
CACNA1A-259ENST00000638114 SLC2A1P11166 492 aa14.1□□□□□ -0.15
CACNA1A-259ENST00000638114 PAICSP22234 425 aaKnown RBP14.1□□□□□ -0.15
CACNA1A-259ENST00000638114 PRKACGP22612 351 aa14.1□□□□□ -0.15
CACNA1A-259ENST00000638114 ZNF92Q03936 586 aa14.1□□□□□ -0.15
CACNA1A-259ENST00000638114 SCGB2A2Q13296 93 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms