RNA–Protein interactions for RNA: ENST00000638031.1

CHRNA7-233, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5

Gene CHRNA7, Length 1,133 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-233	ENST00000638031	TRAV20	A0A0B4J274	112 aa		15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	FAM183A	A6NL82	134 aa		15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	ZNF593	O00488	134 aa	Predicted RBP	15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	GYG2	O15488	501 aa		15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	LCAT	P04180	440 aa		15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	HLA-DPB1	P04440	258 aa		15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	SBK2	P0C263	348 aa		15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	PRKACG	P22612	351 aa		15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	SRP14	P37108	136 aa	Known RBP	15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	SEC61A1	P61619	476 aa	Known RBP	15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	ZMYND11	Q15326	602 aa		15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	DCXR	Q7Z4W1	244 aa		15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	LRRC28	Q86X40	367 aa	Predicted RBP	15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	ATG16L2	Q8NAA4	619 aa		15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	OR13G1	Q8NGZ3	307 aa		15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	ZNF420	Q8TAQ5	688 aa	Predicted RBP	15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	ST7L	Q8TDW4	575 aa		15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	POP5	Q969H6	163 aa	Known RBP	15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	MEGF10	Q96KG7	1140 aa		15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	GAL3ST1	Q99999	423 aa		15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	C19orf24	Q9BVV8	132 aa		15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	CMC2	Q9NRP2	79 aa		15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	UBAP1	Q9NZ09	502 aa		15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	BAIAP2	Q9UQB8	552 aa		15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	PPP1R3C	Q9UQK1	317 aa		15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	POMP	Q9Y244	141 aa		15.83	■□□□□ 0.12
CHRNA7-233	ENST00000638031	TCRBV3S1	A0A5B6	114 aa		15.82	■□□□□ 0.12
CHRNA7-233	ENST00000638031	ISPD	A4D126	451 aa		15.82	■□□□□ 0.12
CHRNA7-233	ENST00000638031		F5H5P2	479 aa		15.82	■□□□□ 0.12
CHRNA7-233	ENST00000638031	TMEM178B	H3BS89	294 aa		15.82	■□□□□ 0.12
CHRNA7-233	ENST00000638031		M0R135	149 aa		15.82	■□□□□ 0.12
CHRNA7-233	ENST00000638031	TNFRSF1A	P19438	455 aa		15.82	■□□□□ 0.12
CHRNA7-233	ENST00000638031	MMP16	P51512	607 aa		15.82	■□□□□ 0.12
CHRNA7-233	ENST00000638031	SLC3A1	Q07837	685 aa		15.82	■□□□□ 0.12
CHRNA7-233	ENST00000638031	MAB21L1	Q13394	359 aa		15.82	■□□□□ 0.12
CHRNA7-233	ENST00000638031	TEX30	Q5JUR7	227 aa		15.82	■□□□□ 0.12
CHRNA7-233	ENST00000638031	PAPD5	Q8NDF8	572 aa	Known RBP	15.82	■□□□□ 0.12
CHRNA7-233	ENST00000638031	RAB39B	Q96DA2	213 aa		15.82	■□□□□ 0.12
CHRNA7-233	ENST00000638031	ZNF799	Q96GE5	643 aa		15.82	■□□□□ 0.12
CHRNA7-233	ENST00000638031	CADM1	Q9BY67	442 aa	Known RBP	15.82	■□□□□ 0.12
CHRNA7-233	ENST00000638031	NTN4	Q9HB63	628 aa		15.82	■□□□□ 0.12
CHRNA7-233	ENST00000638031	PDP1	Q9P0J1	537 aa	Predicted RBP	15.82	■□□□□ 0.12
CHRNA7-233	ENST00000638031	LOC105371242	A0A075B767	164 aa		15.81	■□□□□ 0.12
CHRNA7-233	ENST00000638031	ARRDC5	A6NEK1	342 aa		15.81	■□□□□ 0.12
CHRNA7-233	ENST00000638031	GSC2	O15499	205 aa		15.81	■□□□□ 0.12
CHRNA7-233	ENST00000638031	ZNF205	O95201	554 aa		15.81	■□□□□ 0.12
CHRNA7-233	ENST00000638031	ANPEP	P15144	967 aa		15.81	■□□□□ 0.12
CHRNA7-233	ENST00000638031	TNFSF4	P23510	183 aa		15.81	■□□□□ 0.12
CHRNA7-233	ENST00000638031	FMO3	P31513	532 aa		15.81	■□□□□ 0.12
CHRNA7-233	ENST00000638031	ENTPD1	P49961	510 aa		15.81	■□□□□ 0.12
CHRNA7-233	ENST00000638031	TPTE	P56180	551 aa		15.81	■□□□□ 0.12
CHRNA7-233	ENST00000638031	LCN2	P80188	198 aa		15.81	■□□□□ 0.12
CHRNA7-233	ENST00000638031	HOXA4	Q00056	320 aa	Predicted RBP	15.81	■□□□□ 0.12
CHRNA7-233	ENST00000638031	ZNF92	Q03936	586 aa		15.81	■□□□□ 0.12
CHRNA7-233	ENST00000638031	RFLNB	Q8N5W9	214 aa		15.81	■□□□□ 0.12
CHRNA7-233	ENST00000638031	OR2AE1	Q8NHA4	323 aa		15.81	■□□□□ 0.12
CHRNA7-233	ENST00000638031	AMELY	Q99218	206 aa		15.81	■□□□□ 0.12
CHRNA7-233	ENST00000638031	METTL17	Q9H7H0	456 aa	Predicted RBP	15.81	■□□□□ 0.12
CHRNA7-233	ENST00000638031	OPN4	Q9UHM6	478 aa		15.81	■□□□□ 0.12
CHRNA7-233	ENST00000638031	TRAPPC2L	H3BP13	241 aa		15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031	FKBP6	O75344	327 aa		15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031	CYB5R3	P00387	301 aa	Predicted RBP	15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031	PNP	P00491	289 aa		15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031	SPARC	P09486	303 aa		15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031	SLC2A1	P11166	492 aa		15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031	GRK5	P34947	590 aa		15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031	PRKX	P51817	358 aa		15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031	BTG1	P62324	171 aa		15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031	FLOT2	Q14254	428 aa		15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031	GK3P	Q14409	553 aa		15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031	GINS1	Q14691	196 aa		15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031	DNAL1	Q4LDG9	190 aa		15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031	FAM201A	Q5SY85	155 aa		15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031	SPATC1	Q76KD6	591 aa		15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031	SPATA24	Q86W54	205 aa		15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031	SLAMF6	Q96DU3	332 aa		15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031	PATZ1	Q9HBE1	687 aa	Known RBP	15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031	TMEM165	Q9HC07	324 aa		15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031	MMP26	Q9NRE1	261 aa		15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031	TMEM100	Q9NV29	134 aa		15.8	■□□□□ 0.12
CHRNA7-233	ENST00000638031		F5H0A9	414 aa	Predicted RBP	15.79	■□□□□ 0.12
CHRNA7-233	ENST00000638031		H3BN98	237 aa		15.79	■□□□□ 0.12
CHRNA7-233	ENST00000638031	SURF4	O15260	269 aa		15.79	■□□□□ 0.12
CHRNA7-233	ENST00000638031	DNAJC8	O75937	253 aa	Predicted RBP	15.79	■□□□□ 0.12
CHRNA7-233	ENST00000638031	ADRA2C	P18825	462 aa		15.79	■□□□□ 0.12
CHRNA7-233	ENST00000638031	PCMT1	P22061	227 aa		15.79	■□□□□ 0.12
CHRNA7-233	ENST00000638031	SLC6A9	P48067	706 aa		15.79	■□□□□ 0.12
CHRNA7-233	ENST00000638031	CDK5	Q00535	292 aa		15.79	■□□□□ 0.12
CHRNA7-233	ENST00000638031	BNIP1	Q12981	228 aa		15.79	■□□□□ 0.12
CHRNA7-233	ENST00000638031	GLYATL3	Q5SZD4	288 aa		15.79	■□□□□ 0.12
CHRNA7-233	ENST00000638031	SLC27A4	Q6P1M0	643 aa		15.79	■□□□□ 0.12
CHRNA7-233	ENST00000638031	PGAP1	Q75T13	922 aa		15.79	■□□□□ 0.12
CHRNA7-233	ENST00000638031	DPY19L4	Q7Z388	723 aa		15.79	■□□□□ 0.12
CHRNA7-233	ENST00000638031	PEG10	Q86TG7	708 aa	Known RBP	15.79	■□□□□ 0.12
CHRNA7-233	ENST00000638031	MOGAT3	Q86VF5	341 aa		15.79	■□□□□ 0.12
CHRNA7-233	ENST00000638031	OR6K6	Q8NGW6	343 aa		15.79	■□□□□ 0.12
CHRNA7-233	ENST00000638031	TEX47	Q8TBZ9	253 aa		15.79	■□□□□ 0.12
CHRNA7-233	ENST00000638031	MARCH7	Q9H992	704 aa		15.79	■□□□□ 0.12
CHRNA7-233	ENST00000638031	CENPM	Q9NSP4	180 aa		15.79	■□□□□ 0.12
CHRNA7-233	ENST00000638031	WNK2	Q9Y3S1	2297 aa		15.78	■□□□□ 0.12

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