RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 SLC7A6OSQ96CW6 309 aaPredicted RBP14.93□□□□□ -0.02
PNKP-230ENST00000638016 MEGF10Q96KG7 1140 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 FEVQ99581 238 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 C19orf24Q9BVV8 132 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 TMPRSS13Q9BYE2 586 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 NMNAT2Q9BZQ4 307 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 TUBG2Q9NRH3 451 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 IL19Q9UHD0 177 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 PPP1R3CQ9UQK1 317 aa14.93□□□□□ -0.02
PNKP-230ENST00000638016 DHRS12A0PJE2 317 aa14.92□□□□□ -0.02
PNKP-230ENST00000638016 M0R135 149 aa14.92□□□□□ -0.02
PNKP-230ENST00000638016 CYB5R3P00387 301 aaPredicted RBP14.92□□□□□ -0.02
PNKP-230ENST00000638016 PNPP00491 289 aa14.92□□□□□ -0.02
PNKP-230ENST00000638016 SLC2A1P11166 492 aa14.92□□□□□ -0.02
PNKP-230ENST00000638016 THBS2P35442 1172 aa14.92□□□□□ -0.02
PNKP-230ENST00000638016 SLC3A1Q07837 685 aa14.92□□□□□ -0.02
PNKP-230ENST00000638016 FAM201AQ5SY85 155 aa14.92□□□□□ -0.02
PNKP-230ENST00000638016 OR2T33Q8NG76 320 aa14.92□□□□□ -0.02
PNKP-230ENST00000638016 OR6K6Q8NGW6 343 aa14.92□□□□□ -0.02
PNKP-230ENST00000638016 GIPC3Q8TF64 312 aa14.92□□□□□ -0.02
PNKP-230ENST00000638016 DVL3Q92997 716 aaPredicted RBP14.92□□□□□ -0.02
PNKP-230ENST00000638016 SLCO4A1Q96BD0 722 aa14.92□□□□□ -0.02
PNKP-230ENST00000638016 ZNF799Q96GE5 643 aa14.92□□□□□ -0.02
PNKP-230ENST00000638016 ZNF582Q96NG8 517 aaPredicted RBP14.92□□□□□ -0.02
PNKP-230ENST00000638016 SLC30A2Q9BRI3 323 aa14.92□□□□□ -0.02
PNKP-230ENST00000638016 GCM1Q9NP62 436 aa14.92□□□□□ -0.02
PNKP-230ENST00000638016 TNFRSF1AP19438 455 aa14.91□□□□□ -0.02
PNKP-230ENST00000638016 PCMT1P22061 227 aa14.91□□□□□ -0.02
PNKP-230ENST00000638016 PMELP40967 661 aa14.91□□□□□ -0.02
PNKP-230ENST00000638016 SLC6A9P48067 706 aa14.91□□□□□ -0.02
PNKP-230ENST00000638016 PRKXP51817 358 aa14.91□□□□□ -0.02
PNKP-230ENST00000638016 BTG1P62324 171 aa14.91□□□□□ -0.02
PNKP-230ENST00000638016 LINC01590Q5TEZ4 76 aa14.91□□□□□ -0.02
PNKP-230ENST00000638016 SHQ1Q6PI26 577 aaKnown RBP14.91□□□□□ -0.02
PNKP-230ENST00000638016 MOGAT3Q86VF5 341 aa14.91□□□□□ -0.02
PNKP-230ENST00000638016 REPIN1Q9BWE0 567 aaKnown RBP14.91□□□□□ -0.02
PNKP-230ENST00000638016 OCEL1Q9H607 264 aa14.91□□□□□ -0.02
PNKP-230ENST00000638016 DDX28Q9NUL7 540 aaKnown RBP14.91□□□□□ -0.02
PNKP-230ENST00000638016 TMEM178BH3BS89 294 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 GYG2O15488 501 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 ANPEPP15144 967 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 PRKACGP22612 351 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 ENTPD1P49961 510 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 SLC25A1P53007 311 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 TPTEP56180 551 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 ZNF92Q03936 586 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 ECH1Q13011 328 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 GLYATL3Q5SZD4 288 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 PEG10Q86TG7 708 aaKnown RBP14.9□□□□□ -0.02
PNKP-230ENST00000638016 SPATA24Q86W54 205 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 C19orf18Q8NEA5 215 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 OR13G1Q8NGZ3 307 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 TEX47Q8TBZ9 253 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 OTULINQ96BN8 352 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 SLAMF6Q96DU3 332 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 AMELYQ99218 206 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 COPS4Q9BT78 406 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 MMP26Q9NRE1 261 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 CMC2Q9NRP2 79 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 CENPMQ9NSP4 180 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 PDP1Q9P0J1 537 aaPredicted RBP14.9□□□□□ -0.02
PNKP-230ENST00000638016 KCNG2Q9UJ96 466 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 METRNQ9UJH8 293 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 BAIAP2Q9UQB8 552 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 N6AMT1Q9Y5N5 214 aa14.9□□□□□ -0.02
PNKP-230ENST00000638016 A0A0G2JMP0 313 aa14.89□□□□□ -0.03
PNKP-230ENST00000638016 A0A0X1KG70 313 aa14.89□□□□□ -0.03
PNKP-230ENST00000638016 AQP12BA6NM10 295 aa14.89□□□□□ -0.03
PNKP-230ENST00000638016 H3BN98 237 aa14.89□□□□□ -0.03
PNKP-230ENST00000638016 ZNF593O00488 134 aaPredicted RBP14.89□□□□□ -0.03
PNKP-230ENST00000638016 VENTXO95231 258 aa14.89□□□□□ -0.03
PNKP-230ENST00000638016 POU1F1P28069 291 aa14.89□□□□□ -0.03
PNKP-230ENST00000638016 FMO3P31513 532 aa14.89□□□□□ -0.03
PNKP-230ENST00000638016 OTX1P32242 354 aaPredicted RBP14.89□□□□□ -0.03
PNKP-230ENST00000638016 MAB21L1Q13394 359 aa14.89□□□□□ -0.03
PNKP-230ENST00000638016 FLOT2Q14254 428 aa14.89□□□□□ -0.03
PNKP-230ENST00000638016 DCAF12L2Q5VW00 463 aa14.89□□□□□ -0.03
PNKP-230ENST00000638016 PRAMEF6Q5VXH4 476 aa14.89□□□□□ -0.03
PNKP-230ENST00000638016 CD300LDQ6UXZ3 194 aa14.89□□□□□ -0.03
PNKP-230ENST00000638016 LRRC28Q86X40 367 aaPredicted RBP14.89□□□□□ -0.03
PNKP-230ENST00000638016 AQP12AQ8IXF9 295 aa14.89□□□□□ -0.03
PNKP-230ENST00000638016 RFLNBQ8N5W9 214 aa14.89□□□□□ -0.03
PNKP-230ENST00000638016 OR4M2Q8NGB6 313 aa14.89□□□□□ -0.03
PNKP-230ENST00000638016 ST7LQ8TDW4 575 aa14.89□□□□□ -0.03
PNKP-230ENST00000638016 OPN4Q9UHM6 478 aa14.89□□□□□ -0.03
PNKP-230ENST00000638016 PCDHB10Q9UN67 800 aa14.89□□□□□ -0.03
PNKP-230ENST00000638016 RIIAD1A6NNX1 92 aa14.88□□□□□ -0.03
PNKP-230ENST00000638016 GNGT2O14610 69 aa14.88□□□□□ -0.03
PNKP-230ENST00000638016 SURF4O15260 269 aa14.88□□□□□ -0.03
PNKP-230ENST00000638016 TCF21O43680 179 aa14.88□□□□□ -0.03
PNKP-230ENST00000638016 ZNF3P17036 446 aa14.88□□□□□ -0.03
PNKP-230ENST00000638016 GRK5P34947 590 aa14.88□□□□□ -0.03
PNKP-230ENST00000638016 PCK2Q16822 640 aa14.88□□□□□ -0.03
PNKP-230ENST00000638016 PGAP1Q75T13 922 aa14.88□□□□□ -0.03
PNKP-230ENST00000638016 MRPL21Q7Z2W9 205 aaKnown RBP14.88□□□□□ -0.03
PNKP-230ENST00000638016 ERI1Q8IV48 349 aaKnown RBP14.88□□□□□ -0.03
PNKP-230ENST00000638016 OR6N2Q8NGY6 317 aa14.88□□□□□ -0.03
PNKP-230ENST00000638016 SPTSSAQ969W0 71 aa14.88□□□□□ -0.03
PNKP-230ENST00000638016 PATZ1Q9HBE1 687 aaKnown RBP14.88□□□□□ -0.03
PNKP-230ENST00000638016 TMEM100Q9NV29 134 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms