RNA–Protein interactions for RNA: ENST00000637941.1

TCF4-289, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 2,115 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-289ENST00000637941 NKX3-1Q99801 234 aaPredicted RBP11.35□□□□□ -0.59
TCF4-289ENST00000637941 VRK1Q99986 396 aaPredicted RBP11.35□□□□□ -0.59
TCF4-289ENST00000637941 ZMAT3Q9HA38 289 aaKnown RBP11.35□□□□□ -0.59
TCF4-289ENST00000637941 KLHL13Q9P2N7 655 aa11.35□□□□□ -0.59
TCF4-289ENST00000637941 RP1P56715 2156 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 C9orf170A2RU37 121 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 ZNF878C9JN71 531 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 ADAM10O14672 748 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 CSN2P05814 226 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 HEXBP07686 556 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 GIMD1P0DJR0 217 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 BIDP55957 195 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 FBXW4P57775 412 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 CLRN1P58418 232 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 BTN1A1Q13410 526 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 NKPD1Q17RQ9 610 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 SLC25A53Q5H9E4 307 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 OR10K2Q6IF99 312 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 CORO6Q6QEF8 472 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 OR10R2Q8NGX6 335 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 ARL5BQ96KC2 179 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 SCGB3A2Q96PL1 93 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 C1QTNF6Q9BXI9 259 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 ZNF768Q9H5H4 540 aaKnown RBP11.34□□□□□ -0.59
TCF4-289ENST00000637941 MED29Q9NX70 200 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 PPP4R1LQ9P1A2 415 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 MYEF2Q9P2K5 600 aaKnown RBP11.34□□□□□ -0.59
TCF4-289ENST00000637941 CTSFQ9UBX1 484 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 FBXO4Q9UKT5 387 aa11.34□□□□□ -0.59
TCF4-289ENST00000637941 TOX3O15405 576 aaPredicted RBP11.33□□□□□ -0.6
TCF4-289ENST00000637941 DUS4LO95620 317 aaKnown RBP11.33□□□□□ -0.6
TCF4-289ENST00000637941 IGHG1P01857 330 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 DCNP07585 359 aaKnown RBP11.33□□□□□ -0.6
TCF4-289ENST00000637941 GSTP1P09211 210 aaKnown RBP11.33□□□□□ -0.6
TCF4-289ENST00000637941 VSIG8P0DPA2 414 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 ZNF93P35789 620 aaPredicted RBP11.33□□□□□ -0.6
TCF4-289ENST00000637941 CLDN6P56747 220 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 QRFPP83859 136 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 FOXF1Q12946 379 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 EIF3IQ13347 325 aaKnown RBP11.33□□□□□ -0.6
TCF4-289ENST00000637941 SQSTM1Q13501 440 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 PPP1R1AQ13522 171 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 RHBDD2Q6NTF9 364 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 ZNF529Q6P280 563 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 MOB3CQ70IA8 216 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 ANKRD37Q7Z713 158 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 UEVLDQ8IX04 471 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 ZBTB44Q8NCP5 570 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 OR4S1Q8NGB4 309 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 OR52N4Q8NGI2 321 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 STT3BQ8TCJ2 826 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 PPP1R1CQ8WVI7 109 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 KLRF1Q9NZS2 232 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 MRPS17Q9Y2R5 130 aaKnown RBP11.33□□□□□ -0.6
TCF4-289ENST00000637941 POLR1DQ9Y2S0 133 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 IGLV3-12A0A075B6K2 115 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 TMEM14DPA8MWL7 114 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 LMX1BO60663 402 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 UNC119Q13432 240 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 FAM122CQ6P4D5 195 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 UQCC3Q6UW78 93 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 PAQR4Q8N4S7 273 aaPredicted RBP11.33□□□□□ -0.6
TCF4-289ENST00000637941 NOXO1Q8NFA2 376 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 HLA-CQ95604 372 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 ARPC5LQ9BPX5 153 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 ZNF471Q9BX82 626 aaPredicted RBP11.33□□□□□ -0.6
TCF4-289ENST00000637941 GAREM1Q9H706 876 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 ZNF230Q9UIE0 474 aaPredicted RBP11.33□□□□□ -0.6
TCF4-289ENST00000637941 VDAC3Q9Y277 283 aa11.33□□□□□ -0.6
TCF4-289ENST00000637941 TEX46H3BTG2 121 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 NR2C1P13056 603 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 CTRB1P17538 263 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 CNR1P21554 472 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 FKBP2P26885 142 aaKnown RBP11.32□□□□□ -0.6
TCF4-289ENST00000637941 HRH1P35367 487 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 CASRP41180 1078 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 CBX5P45973 191 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 CX3CR1P49238 355 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 LUMP51884 338 aaPredicted RBP11.32□□□□□ -0.6
TCF4-289ENST00000637941 EMP2P54851 167 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 ADAMTS20P59510 1910 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 ACY1Q03154 408 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 CFHR1Q03591 330 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 PNLIPRP3Q17RR3 467 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 CTRB2Q6GPI1 263 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 COX15Q7KZN9 410 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 ZNF101Q8IZC7 436 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 ARRDC1Q8N5I2 433 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 APCDD1LQ8NCL9 501 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 KCNG3Q8TAE7 436 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 RNF138Q8WVD3 245 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 MRPS24Q96EL2 167 aaKnown RBP11.32□□□□□ -0.6
TCF4-289ENST00000637941 ADAT3Q96EY9 351 aaPredicted RBP11.32□□□□□ -0.6
TCF4-289ENST00000637941 CST11Q9H112 138 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 PIGMQ9H3S5 423 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 TAS2R3Q9NYW6 316 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 GPR160Q9UJ42 338 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 PRELID1Q9Y255 219 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 IGLV3-32A0A0A0MS00 114 aa11.32□□□□□ -0.6
TCF4-289ENST00000637941 IGKV1D-43A0A0B4J1Z2 117 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms