RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 ZNF416Q9BWM5 594 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 NDEL1Q9GZM8 345 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 WNT5BQ9H1J7 359 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 OR51B6Q9H340 312 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 TXNIPQ9H3M7 391 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 POFUT1Q9H488 388 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 ISYNA1Q9NPH2 558 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 CMC2Q9NRP2 79 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 INIPQ9NRY2 104 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 LSM2Q9Y333 95 aaKnown RBP6.69□□□□□ -1.34
PNKP-229ENST00000637897 CMAHPQ9Y471 501 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 CACNG2Q9Y698 323 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 NBEAL1Q6ZS30 2694 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 WNK2Q9Y3S1 2297 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 LOC100289279A0A1B0GTE1 492 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 NPIPB13A6NJU9 1138 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 NPIPB4C9JG80 1138 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 MCIDASD6RGH6 385 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 H7C1C5 153 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 SYNGR3O43761 229 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 IDH3BO43837 385 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 NDUFB2O95178 105 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 OR6A2O95222 327 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 NGFP01138 241 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 AVPP01185 164 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 IGHG1P01857 330 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 HSMCR30P0CW71 290 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 APEHP13798 732 aaKnown RBP6.68□□□□□ -1.34
PNKP-229ENST00000637897 ZNF3P17036 446 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 ZNF32P17041 273 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 ANOS1P23352 680 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 GADD45AP24522 165 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 MPV17P39210 176 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 GZMKP49863 264 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 VBP1P61758 197 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 LMO4P61968 165 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 LCN6P62502 163 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 MRPS34P82930 218 aaKnown RBP6.68□□□□□ -1.34
PNKP-229ENST00000637897 PSG4Q00888 419 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 MLLT11Q13015 90 aaPredicted RBP6.68□□□□□ -1.34
PNKP-229ENST00000637897 AQP6Q13520 282 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 DCTN2Q13561 401 aaKnown RBP6.68□□□□□ -1.34
PNKP-229ENST00000637897 CARTPTQ16568 116 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 MOGQ16653 247 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 NRN1LQ496H8 165 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 PABPC1L2AQ5JQF8 200 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 THSD4Q6ZMP0 1018 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 USP43Q70EL4 1123 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 BCDIN3DQ7Z5W3 292 aaKnown RBP6.68□□□□□ -1.34
PNKP-229ENST00000637897 CROCCP3Q8IVE0 287 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 CPOQ8IVL8 374 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 SLC30A7Q8NEW0 376 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 OR51A7Q8NH64 312 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 AKR7LQ8NHP1 331 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 CLDND2Q8NHS1 167 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 TBC1D15Q8TC07 691 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 DYNC2LI1Q8TCX1 351 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 NEU4Q8WWR8 484 aaPredicted RBP6.68□□□□□ -1.34
PNKP-229ENST00000637897 NSMAFQ92636 917 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 OR5M11Q96RB7 305 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 SNX18Q96RF0 628 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 KCNS3Q9BQ31 491 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 JAM3Q9BX67 310 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 RAB1BQ9H0U4 201 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 CHODLQ9H9P2 273 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 PLGRKTQ9HBL7 147 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 MOV10Q9HCE1 1003 aaKnown RBP6.68□□□□□ -1.34
PNKP-229ENST00000637897 B3GAT2Q9NPZ5 323 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 HINT3Q9NQE9 182 aaKnown RBP6.68□□□□□ -1.34
PNKP-229ENST00000637897 ZNF275Q9NSD4 429 aaPredicted RBP6.68□□□□□ -1.34
PNKP-229ENST00000637897 DCAF16Q9NXF7 216 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 KLHL21Q9UJP4 597 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 EXOGQ9Y2C4 368 aaKnown RBP6.68□□□□□ -1.34
PNKP-229ENST00000637897 ADAM18Q9Y3Q7 739 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 FKBP7Q9Y680 259 aa6.68□□□□□ -1.34
PNKP-229ENST00000637897 SLC22A31A6NKX4 558 aa6.67□□□□□ -1.34
PNKP-229ENST00000637897 CENPBD1B2RD01 187 aa6.67□□□□□ -1.34
PNKP-229ENST00000637897 PRR23D1E9PI22 279 aaPredicted RBP6.67□□□□□ -1.34
PNKP-229ENST00000637897 M0R233 179 aa6.67□□□□□ -1.34
PNKP-229ENST00000637897 TGFAP01135 160 aa6.67□□□□□ -1.34
PNKP-229ENST00000637897 IGHA1P01876 353 aa6.67□□□□□ -1.34
PNKP-229ENST00000637897 PRR23D2P0DMB1 279 aaPredicted RBP6.67□□□□□ -1.34
PNKP-229ENST00000637897 BMP4P12644 408 aa6.67□□□□□ -1.34
PNKP-229ENST00000637897 CPEP16870 476 aa6.67□□□□□ -1.34
PNKP-229ENST00000637897 PSMA1P25786 263 aaKnown RBP6.67□□□□□ -1.34
PNKP-229ENST00000637897 LAP3P28838 519 aa6.67□□□□□ -1.34
PNKP-229ENST00000637897 NOS3P29474 1203 aa6.67□□□□□ -1.34
PNKP-229ENST00000637897 ATP6V1E1P36543 226 aa6.67□□□□□ -1.34
PNKP-229ENST00000637897 ETV1P50549 477 aa6.67□□□□□ -1.34
PNKP-229ENST00000637897 MMP15P51511 669 aa6.67□□□□□ -1.34
PNKP-229ENST00000637897 UCP2P55851 309 aa6.67□□□□□ -1.34
PNKP-229ENST00000637897 WNT4P56705 351 aa6.67□□□□□ -1.34
PNKP-229ENST00000637897 CLRN1P58418 232 aa6.67□□□□□ -1.34
PNKP-229ENST00000637897 CTXN1P60606 82 aa6.67□□□□□ -1.34
PNKP-229ENST00000637897 NCS1P62166 190 aa6.67□□□□□ -1.34
PNKP-229ENST00000637897 ERVK-25P63136 954 aa6.67□□□□□ -1.34
PNKP-229ENST00000637897 POU4F2Q12837 409 aa6.67□□□□□ -1.34
PNKP-229ENST00000637897 TSTQ16762 297 aaKnown RBP6.67□□□□□ -1.34
PNKP-229ENST00000637897 CR1LQ2VPA4 569 aa6.67□□□□□ -1.34
PNKP-229ENST00000637897 ZNF829Q3KNS6 432 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms