RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 NPIPA1Q9UND3 350 aa12.96□□□□□ -0.34
CLN6-215ENST00000636674 SLC5A6Q9Y289 635 aa12.96□□□□□ -0.34
CLN6-215ENST00000636674 RP1P56715 2156 aa12.96□□□□□ -0.34
CLN6-215ENST00000636674 LOC101059948A0A1B0GTJ6 334 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 ANKUB1A6NFN9 424 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 TMEM14DPA8MWL7 114 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 EFSO43281 561 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 FGF16O43320 207 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 VSIG8P0DPA2 414 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 IL11P20809 199 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 FBLP22087 321 aaKnown RBP12.95□□□□□ -0.34
CLN6-215ENST00000636674 SUMO3P55854 103 aaPredicted RBP12.95□□□□□ -0.34
CLN6-215ENST00000636674 NSDHLQ15738 373 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 PNLIPRP3Q17RR3 467 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 HYAL4Q2M3T9 481 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 LRRC37A5PQ49AS3 106 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 PABPC1L2AQ5JQF8 200 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 ELP2Q6IA86 826 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 H1FNTQ75WM6 255 aaPredicted RBP12.95□□□□□ -0.34
CLN6-215ENST00000636674 LINC00346Q8IVM7 164 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 INO80EQ8NBZ0 244 aaPredicted RBP12.95□□□□□ -0.34
CLN6-215ENST00000636674 LMX1AQ8TE12 382 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 FGGYQ96C11 551 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 SEC22AQ96IW7 307 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 NKX6-2Q9C056 277 aaPredicted RBP12.95□□□□□ -0.34
CLN6-215ENST00000636674 MYEF2Q9P2K5 600 aaKnown RBP12.95□□□□□ -0.34
CLN6-215ENST00000636674 MKL2Q9ULH7 1088 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 OR2AT4A6NND4 320 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 CEACAM18A8MTB9 384 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 NUPL2O15504 423 aaKnown RBP12.95□□□□□ -0.34
CLN6-215ENST00000636674 CSN2P05814 226 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 CRHP06850 196 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 H2AFB1P0C5Y9 115 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 LIPCP11150 499 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 HRH1P35367 487 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 NAAAQ02083 359 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 HOGA1Q86XE5 327 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.95□□□□□ -0.34
CLN6-215ENST00000636674 GVQW1Q8N7I0 195 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 OR52N4Q8NGI2 321 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 NUDCD2Q8WVJ2 157 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 MARC2Q969Z3 335 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 CDC6Q99741 560 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 NMES1Q9C002 83 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 PCDHB16Q9NRJ7 776 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 MBD2Q9UBB5 411 aa12.95□□□□□ -0.34
CLN6-215ENST00000636674 DHCR7Q9UBM7 475 aaKnown RBP12.95□□□□□ -0.34
CLN6-215ENST00000636674 PURGQ9UJV8 347 aaKnown RBP12.95□□□□□ -0.34
CLN6-215ENST00000636674 ADAMTS9Q9P2N4 1935 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 IGKV1D-43A0A0B4J1Z2 117 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 TEX13DA0A0J9YY54 714 aaPredicted RBP12.94□□□□□ -0.34
CLN6-215ENST00000636674 SSX5O60225 188 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 NAT1P18440 290 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 CX3CR1P49238 355 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 HSF1Q00613 529 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 CCDC157Q569K6 752 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 PDSS1Q5T2R2 415 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 OR52W1Q6IF63 320 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 OGFOD3Q6PK18 319 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 WDFY1Q8IWB7 410 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 TMEM185AQ8NFB2 350 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 OR10R2Q8NGX6 335 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 OR10Z1Q8NGY1 313 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 NKD1Q969G9 470 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 CMBLQ96DG6 245 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 ADAT3Q96EY9 351 aaPredicted RBP12.94□□□□□ -0.34
CLN6-215ENST00000636674 PIK3IP1Q96FE7 263 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 NPAS1Q99742 590 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 CHRDQ9H2X0 955 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 MOB1AQ9H8S9 216 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 FN3KRPQ9HA64 309 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 ZNF304Q9HCX3 659 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 CHST11Q9NPF2 352 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 SLC2A4RGQ9NR83 387 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 PCDHB10Q9UN67 800 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 KCNK7Q9Y2U2 307 aa12.94□□□□□ -0.34
CLN6-215ENST00000636674 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.93□□□□□ -0.34
CLN6-215ENST00000636674 A0A1W2PR77 199 aa12.93□□□□□ -0.34
CLN6-215ENST00000636674 NUDT19A8MXV4 375 aa12.93□□□□□ -0.34
CLN6-215ENST00000636674 F5H0A9 414 aaPredicted RBP12.93□□□□□ -0.34
CLN6-215ENST00000636674 SMAD9O15198 467 aaKnown RBP12.93□□□□□ -0.34
CLN6-215ENST00000636674 ZNF208O43345 1280 aa12.93□□□□□ -0.34
CLN6-215ENST00000636674 SYT7O43581 403 aa12.93□□□□□ -0.34
CLN6-215ENST00000636674 ATG12O94817 140 aa12.93□□□□□ -0.34
CLN6-215ENST00000636674 ERCC1P07992 297 aaPredicted RBP12.93□□□□□ -0.34
CLN6-215ENST00000636674 CHRM2P08172 466 aa12.93□□□□□ -0.34
CLN6-215ENST00000636674 GLULP15104 373 aa12.93□□□□□ -0.34
CLN6-215ENST00000636674 APOBEC1P41238 236 aaKnown RBP12.93□□□□□ -0.34
CLN6-215ENST00000636674 CLDN6P56747 220 aa12.93□□□□□ -0.34
CLN6-215ENST00000636674 HSD11B2P80365 405 aa12.93□□□□□ -0.34
CLN6-215ENST00000636674 DEFA5Q01523 94 aa12.93□□□□□ -0.34
CLN6-215ENST00000636674 FLI1Q01543 452 aaPredicted RBP12.93□□□□□ -0.34
CLN6-215ENST00000636674 SQSTM1Q13501 440 aa12.93□□□□□ -0.34
CLN6-215ENST00000636674 KDM8Q8N371 416 aa12.93□□□□□ -0.34
CLN6-215ENST00000636674 CHST4Q8NCG5 386 aa12.93□□□□□ -0.34
CLN6-215ENST00000636674 SLC30A7Q8NEW0 376 aa12.93□□□□□ -0.34
CLN6-215ENST00000636674 OR5AP2Q8NGF4 316 aa12.93□□□□□ -0.34
CLN6-215ENST00000636674 OR1L3Q8NH93 324 aa12.93□□□□□ -0.34
CLN6-215ENST00000636674 SLAMF6Q96DU3 332 aa12.93□□□□□ -0.34
CLN6-215ENST00000636674 VN1R1Q9GZP7 353 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms