RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 KCNS3Q9BQ31 491 aa12.61□□□□□ -0.39
LINC00339-208ENST00000634934 NEK6Q9HC98 313 aa12.61□□□□□ -0.39
LINC00339-208ENST00000634934 CYB5R1Q9UHQ9 305 aa12.61□□□□□ -0.39
LINC00339-208ENST00000634934 KCNG2Q9UJ96 466 aa12.61□□□□□ -0.39
LINC00339-208ENST00000634934 LHFPL6Q9Y693 200 aa12.61□□□□□ -0.39
LINC00339-208ENST00000634934 J3QRE1 110 aa12.6□□□□□ -0.39
LINC00339-208ENST00000634934 UBL3O95164 117 aa12.6□□□□□ -0.39
LINC00339-208ENST00000634934 CDRT1O95170 752 aa12.6□□□□□ -0.39
LINC00339-208ENST00000634934 PSKH1P11801 424 aa12.6□□□□□ -0.39
LINC00339-208ENST00000634934 HOXB1P14653 301 aaPredicted RBP12.6□□□□□ -0.39
LINC00339-208ENST00000634934 ZNF32P17041 273 aa12.6□□□□□ -0.39
LINC00339-208ENST00000634934 TFF3Q07654 80 aa12.6□□□□□ -0.39
LINC00339-208ENST00000634934 SNTB1Q13884 538 aaKnown RBP12.6□□□□□ -0.39
LINC00339-208ENST00000634934 EIF2B1Q14232 305 aaKnown RBP12.6□□□□□ -0.39
LINC00339-208ENST00000634934 TIMM23BQ5SRD1 257 aa12.6□□□□□ -0.39
LINC00339-208ENST00000634934 LAX1Q8IWV1 398 aa12.6□□□□□ -0.39
LINC00339-208ENST00000634934 CCDC36Q8IYA8 594 aa12.6□□□□□ -0.39
LINC00339-208ENST00000634934 WDR31Q8NA23 367 aa12.6□□□□□ -0.39
LINC00339-208ENST00000634934 DUSP18Q8NEJ0 188 aa12.6□□□□□ -0.39
LINC00339-208ENST00000634934 MUCL1Q96DR8 90 aa12.6□□□□□ -0.39
LINC00339-208ENST00000634934 ZNF649Q9BS31 505 aa12.6□□□□□ -0.39
LINC00339-208ENST00000634934 SNTG1Q9NSN8 517 aa12.6□□□□□ -0.39
LINC00339-208ENST00000634934 ERVK13-1Q9NX77 482 aa12.6□□□□□ -0.39
LINC00339-208ENST00000634934 ZNF224Q9NZL3 707 aa12.6□□□□□ -0.39
LINC00339-208ENST00000634934 LAMP5Q9UJQ1 280 aa12.6□□□□□ -0.39
LINC00339-208ENST00000634934 ADAM30Q9UKF2 790 aa12.6□□□□□ -0.39
LINC00339-208ENST00000634934 CAB39Q9Y376 341 aaPredicted RBP12.6□□□□□ -0.39
LINC00339-208ENST00000634934 TIMM10BQ9Y5J6 103 aa12.6□□□□□ -0.39
LINC00339-208ENST00000634934 ASH1LQ9NR48 2969 aaKnown RBP12.6□□□□□ -0.39
LINC00339-208ENST00000634934 ZNF503-AS2A6NEH8 195 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 FABP12A6NFH5 140 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 RER1O15258 196 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 RAB1AP62820 205 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 TRAM1Q15629 374 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 GSG1Q2KHT4 349 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 TEX30Q5JUR7 227 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 SLC18B1Q6NT16 456 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 DCXRQ7Z4W1 244 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 DPPA2Q7Z7J5 298 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 MDP1Q86V88 176 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 CDC20BQ86Y33 519 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 OR8H2Q8N162 312 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 CELF2-AS1Q8N7Q2 184 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 ZNF454Q8N9F8 522 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 OTOSQ8NHW6 89 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 THEM6Q8WUY1 208 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 KCTD12Q96CX2 325 aaKnown RBP12.59□□□□□ -0.39
LINC00339-208ENST00000634934 BOD1Q96IK1 185 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 ST6GAL2Q96JF0 529 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 USB1Q9BQ65 265 aaKnown RBP12.59□□□□□ -0.39
LINC00339-208ENST00000634934 C1QTNF6Q9BXI9 259 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 TTTY10Q9BZA0 68 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 PPP1R3EQ9H7J1 279 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 GDF2Q9UK05 429 aaPredicted RBP12.59□□□□□ -0.39
LINC00339-208ENST00000634934 POU2F3Q9UKI9 436 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 AMDHD2Q9Y303 409 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 ICE1Q9Y2F5 2266 aa12.59□□□□□ -0.39
LINC00339-208ENST00000634934 SPTBN1Q01082 2364 aaKnown RBP12.59□□□□□ -0.39
LINC00339-208ENST00000634934 ARPC4-TTLL3A0A0A6YYG9 625 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 A0A1W2PQ09 198 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 ANKRD61A6NGH8 418 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 RGS5O15539 181 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 WNT11O96014 354 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 CSF3P09919 207 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 OR2T7P0C7T2 308 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 ARR3P36575 388 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 IFITM2Q01629 132 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 RIPPLY1Q0D2K3 151 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 SCRN3Q0VDG4 424 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 HNRNPA0Q13151 305 aaKnown RBP12.58□□□□□ -0.4
LINC00339-208ENST00000634934 PPA1Q15181 289 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 TAB1Q15750 504 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 BAK1Q16611 211 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 PCK2Q16822 640 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 HACD4Q5VWC8 232 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 RSBN1Q5VWQ0 802 aaPredicted RBP12.58□□□□□ -0.4
LINC00339-208ENST00000634934 HIST2H2BCQ6DN03 193 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 MZT2AQ6P582 158 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 SPATC1Q76KD6 591 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 SYT9Q86SS6 491 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 KLHL36Q8N4N3 616 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 GJC3Q8NFK1 279 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 OR2T27Q8NH04 317 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 AKR7LQ8NHP1 331 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 HSD17B8Q92506 261 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 ABHD6Q9BV23 337 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 OR2H1Q9GZK4 316 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 OR10A4Q9H209 315 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 C1orf198Q9H425 327 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 NOX3Q9HBY0 568 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 ABCB9Q9NP78 766 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 OBP2BQ9NPH6 170 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 NPDC1Q9NQX5 325 aaPredicted RBP12.58□□□□□ -0.4
LINC00339-208ENST00000634934 B3GNT2Q9NY97 397 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 COPS3Q9UNS2 423 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 KLHDC2Q9Y2U9 406 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 SLC25A15Q9Y619 301 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 TMEM14AQ9Y6G1 99 aa12.58□□□□□ -0.4
LINC00339-208ENST00000634934 A0A1W2PQL4 384 aaPredicted RBP12.57□□□□□ -0.4
LINC00339-208ENST00000634934 DAPL1A0PJW8 107 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms