RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 MSMBP08118 114 aa18.92■□□□□ 0.62
SF1-220ENST00000626028 SPARCP09486 303 aa18.92■□□□□ 0.62
SF1-220ENST00000626028 GRB2P62993 217 aaKnown RBP18.92■□□□□ 0.62
SF1-220ENST00000626028 SHFQ7M4L6 423 aa18.92■□□□□ 0.62
SF1-220ENST00000626028 GLCCI1Q86VQ1 547 aa18.92■□□□□ 0.62
SF1-220ENST00000626028 ZNF283Q8N7M2 679 aa18.92■□□□□ 0.62
SF1-220ENST00000626028 ST7LQ8TDW4 575 aa18.92■□□□□ 0.62
SF1-220ENST00000626028 INTS14Q96SY0 518 aa18.92■□□□□ 0.62
SF1-220ENST00000626028 TOR3AQ9H497 397 aa18.92■□□□□ 0.62
SF1-220ENST00000626028 SLC25A19Q9HC21 320 aa18.92■□□□□ 0.62
SF1-220ENST00000626028 TMEFF2Q9UIK5 374 aaPredicted RBP18.92■□□□□ 0.62
SF1-220ENST00000626028 NOP16Q9Y3C1 178 aaKnown RBP18.92■□□□□ 0.62
SF1-220ENST00000626028 CACNG2Q9Y698 323 aa18.92■□□□□ 0.62
SF1-220ENST00000626028 PRR23D1E9PI22 279 aaPredicted RBP18.91■□□□□ 0.62
SF1-220ENST00000626028 PRR23D2P0DMB1 279 aaPredicted RBP18.91■□□□□ 0.62
SF1-220ENST00000626028 CLUP10909 449 aa18.91■□□□□ 0.62
SF1-220ENST00000626028 POU1F1P28069 291 aa18.91■□□□□ 0.62
SF1-220ENST00000626028 MVKQ03426 396 aa18.91■□□□□ 0.62
SF1-220ENST00000626028 GK2Q14410 553 aaPredicted RBP18.91■□□□□ 0.62
SF1-220ENST00000626028 OR2T2Q6IF00 324 aa18.91■□□□□ 0.62
SF1-220ENST00000626028 ACSM5Q6NUN0 579 aa18.91■□□□□ 0.62
SF1-220ENST00000626028 FAHD1Q6P587 224 aa18.91■□□□□ 0.62
SF1-220ENST00000626028 HS3ST5Q8IZT8 346 aa18.91■□□□□ 0.62
SF1-220ENST00000626028 IQCF1Q8N6M8 205 aa18.91■□□□□ 0.62
SF1-220ENST00000626028 OR51F2Q8NH61 342 aa18.91■□□□□ 0.62
SF1-220ENST00000626028 OR5K1Q8NHB7 308 aa18.91■□□□□ 0.62
SF1-220ENST00000626028 SLAMF6Q96DU3 332 aa18.91■□□□□ 0.62
SF1-220ENST00000626028 KCNJ15Q99712 375 aa18.91■□□□□ 0.62
SF1-220ENST00000626028 COPS4Q9BT78 406 aa18.91■□□□□ 0.62
SF1-220ENST00000626028 SLC22A4Q9H015 551 aa18.91■□□□□ 0.62
SF1-220ENST00000626028 ZNF665Q9H7R5 613 aa18.91■□□□□ 0.62
SF1-220ENST00000626028 SP140LQ9H930 580 aa18.91■□□□□ 0.62
SF1-220ENST00000626028 PAPOLBQ9NRJ5 636 aaKnown RBP18.91■□□□□ 0.62
SF1-220ENST00000626028 TMEM106BQ9NUM4 274 aa18.91■□□□□ 0.62
SF1-220ENST00000626028 TREM2Q9NZC2 230 aa18.91■□□□□ 0.62
SF1-220ENST00000626028 KIF17Q9P2E2 1029 aa18.91■□□□□ 0.62
SF1-220ENST00000626028 PPP1R3CQ9UQK1 317 aa18.91■□□□□ 0.62
SF1-220ENST00000626028 TRAV20A0A0B4J274 112 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 WNT9BO14905 357 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 FCGR1AP12314 374 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 SRD5A1P18405 259 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 PRKACGP22612 351 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 CPT2P23786 658 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 GSTT1P30711 240 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 RPS27P42677 84 aaKnown RBP18.9■□□□□ 0.62
SF1-220ENST00000626028 SLC6A9P48067 706 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 SRP9P49458 86 aaKnown RBP18.9■□□□□ 0.62
SF1-220ENST00000626028 TAF13Q15543 124 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 ATP6AP1Q15904 470 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 CR1LQ2VPA4 569 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 SLC35D3Q5M8T2 416 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 C1orf146Q5VVC0 180 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 LYPD4Q6UWN0 246 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 PGAP1Q75T13 922 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 CELF2-AS1Q8N7Q2 184 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 TMEM186Q96B77 213 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 PLEKHA8Q96JA3 519 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 OR2V2Q96R30 315 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 TMEM100Q9NV29 134 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 NPTNQ9Y639 398 aa18.9■□□□□ 0.62
SF1-220ENST00000626028 FAM183AA6NL82 134 aa18.89■□□□□ 0.61
SF1-220ENST00000626028 TIPRLO75663 272 aa18.89■□□□□ 0.61
SF1-220ENST00000626028 FSTL3O95633 263 aa18.89■□□□□ 0.61
SF1-220ENST00000626028 IGHV2-5P01817 119 aa18.89■□□□□ 0.61
SF1-220ENST00000626028 FASP25445 335 aa18.89■□□□□ 0.61
SF1-220ENST00000626028 ERFP50548 548 aa18.89■□□□□ 0.61
SF1-220ENST00000626028 ESRRGP62508 458 aa18.89■□□□□ 0.61
SF1-220ENST00000626028 AVPI1Q5T686 147 aa18.89■□□□□ 0.61
SF1-220ENST00000626028 MRPL21Q7Z2W9 205 aaKnown RBP18.89■□□□□ 0.61
SF1-220ENST00000626028 NAA40Q86UY6 237 aa18.89■□□□□ 0.61
SF1-220ENST00000626028 TEX29Q8N6K0 151 aa18.89■□□□□ 0.61
SF1-220ENST00000626028 ZNF454Q8N9F8 522 aa18.89■□□□□ 0.61
SF1-220ENST00000626028 REPIN1Q9BWE0 567 aaKnown RBP18.89■□□□□ 0.61
SF1-220ENST00000626028 PRRG3Q9BZD7 231 aa18.89■□□□□ 0.61
SF1-220ENST00000626028 NARFLQ9H6Q4 476 aa18.89■□□□□ 0.61
SF1-220ENST00000626028 ENOPH1Q9UHY7 261 aa18.89■□□□□ 0.61
SF1-220ENST00000626028 AP4S1Q9Y587 144 aa18.89■□□□□ 0.61
SF1-220ENST00000626028 COL6A5A8TX70 2615 aa18.88■□□□□ 0.61
SF1-220ENST00000626028 KIAA1324LA8MWY0 1029 aaPredicted RBP18.88■□□□□ 0.61
SF1-220ENST00000626028 FAM157AC9JC47 383 aa18.88■□□□□ 0.61
SF1-220ENST00000626028 PSKH1P11801 424 aa18.88■□□□□ 0.61
SF1-220ENST00000626028 ZNF181Q2M3W8 571 aa18.88■□□□□ 0.61
SF1-220ENST00000626028 TMEM155Q4W5P6 130 aa18.88■□□□□ 0.61
SF1-220ENST00000626028 ERI1Q8IV48 349 aaKnown RBP18.88■□□□□ 0.61
SF1-220ENST00000626028 TIGD4Q8IY51 512 aa18.88■□□□□ 0.61
SF1-220ENST00000626028 OR5AS1Q8N127 324 aa18.88■□□□□ 0.61
SF1-220ENST00000626028 RNF133Q8WVZ7 376 aa18.88■□□□□ 0.61
SF1-220ENST00000626028 ITLN1Q8WWA0 313 aa18.88■□□□□ 0.61
SF1-220ENST00000626028 ERGIC1Q969X5 290 aa18.88■□□□□ 0.61
SF1-220ENST00000626028 OTULINQ96BN8 352 aa18.88■□□□□ 0.61
SF1-220ENST00000626028 GAL3ST1Q99999 423 aa18.88■□□□□ 0.61
SF1-220ENST00000626028 GCM1Q9NP62 436 aa18.88■□□□□ 0.61
SF1-220ENST00000626028 CENPMQ9NSP4 180 aa18.88■□□□□ 0.61
SF1-220ENST00000626028 SVEP1Q4LDE5 3571 aa18.88■□□□□ 0.61
SF1-220ENST00000626028 G3V2T6 193 aa18.87■□□□□ 0.61
SF1-220ENST00000626028 XRCC2O43543 280 aa18.87■□□□□ 0.61
SF1-220ENST00000626028 IGHV2-70P01814 119 aa18.87■□□□□ 0.61
SF1-220ENST00000626028 GATA3P23771 443 aa18.87■□□□□ 0.61
SF1-220ENST00000626028 GATA4P43694 442 aa18.87■□□□□ 0.61
SF1-220ENST00000626028 CRISP1P54107 249 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms