RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 ZNF362Q5T0B9 420 aaPredicted RBP12.05□□□□□ -0.48
TUBB3-215ENST00000625617 SMARCD3Q6STE5 483 aa12.05□□□□□ -0.48
TUBB3-215ENST00000625617 FIP1L1Q6UN15 594 aaKnown RBP12.05□□□□□ -0.48
TUBB3-215ENST00000625617 LYPD2Q6UXB3 125 aa12.05□□□□□ -0.48
TUBB3-215ENST00000625617 CFAP77Q6ZQR2 320 aa12.05□□□□□ -0.48
TUBB3-215ENST00000625617 TSEN54Q7Z6J9 526 aaKnown RBP12.05□□□□□ -0.48
TUBB3-215ENST00000625617 LINC00346Q8IVM7 164 aa12.05□□□□□ -0.48
TUBB3-215ENST00000625617 SLC26A10Q8NG04 563 aa12.05□□□□□ -0.48
TUBB3-215ENST00000625617 RP9Q8TA86 221 aaKnown RBP12.05□□□□□ -0.48
TUBB3-215ENST00000625617 ERMAPQ96PL5 475 aaPredicted RBP12.05□□□□□ -0.48
TUBB3-215ENST00000625617 PITX2Q99697 317 aa12.05□□□□□ -0.48
TUBB3-215ENST00000625617 ATF6BQ99941 703 aa12.05□□□□□ -0.48
TUBB3-215ENST00000625617 KCTD14Q9BQ13 255 aaPredicted RBP12.05□□□□□ -0.48
TUBB3-215ENST00000625617 PRDM13Q9H4Q3 707 aa12.05□□□□□ -0.48
TUBB3-215ENST00000625617 BEX1Q9HBH7 125 aa12.05□□□□□ -0.48
TUBB3-215ENST00000625617 NOX4Q9NPH5 578 aa12.05□□□□□ -0.48
TUBB3-215ENST00000625617 UFSP2Q9NUQ7 469 aa12.05□□□□□ -0.48
TUBB3-215ENST00000625617 ARGLU1Q9NWB6 273 aaPredicted RBP12.05□□□□□ -0.48
TUBB3-215ENST00000625617 NDUFAF4Q9P032 175 aa12.05□□□□□ -0.48
TUBB3-215ENST00000625617 TMCC3Q9ULS5 477 aa12.05□□□□□ -0.48
TUBB3-215ENST00000625617 NOP16Q9Y3C1 178 aaKnown RBP12.05□□□□□ -0.48
TUBB3-215ENST00000625617 TRRAPQ9Y4A5 3859 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 F5H5K5 113 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 NDUFAB1O14561 156 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 RENP00797 406 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 NCK1P16333 377 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 RHCEP18577 417 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 CFHR2P36980 270 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 PSMB10P40306 273 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 NPY4RP50391 375 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 RAD23AP54725 363 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 TRAP1Q12931 704 aaKnown RBP12.04□□□□□ -0.48
TUBB3-215ENST00000625617 ECH1Q13011 328 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 MAB21L1Q13394 359 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 SEC23BQ15437 767 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 KCNJ8Q15842 424 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 KRTAP27-1Q3LI81 207 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 CLEC12AQ5QGZ9 265 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 PRAMEF6Q5VXH4 476 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 RUSC1-AS1Q66K80 236 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 SLC18B1Q6NT16 456 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 BRICD5Q6PL45 260 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 ZNF841Q6ZN19 808 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 PGAP1Q75T13 922 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 MRPL21Q7Z2W9 205 aaKnown RBP12.04□□□□□ -0.48
TUBB3-215ENST00000625617 TMEM86BQ8N661 226 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 KIR3DL3Q8N743 410 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 C19orf18Q8NEA5 215 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 SPRYD4Q8WW59 207 aaPredicted RBP12.04□□□□□ -0.48
TUBB3-215ENST00000625617 HOPXQ9BPY8 73 aaPredicted RBP12.04□□□□□ -0.48
TUBB3-215ENST00000625617 PCGF1Q9BSM1 259 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 CHIAQ9BZP6 476 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 FN3KRPQ9HA64 309 aa12.04□□□□□ -0.48
TUBB3-215ENST00000625617 PKD1L1Q8TDX9 2849 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 P2RY10O00398 339 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 DYNC1I1O14576 645 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 NDUFA7O95182 113 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 LCATP04180 440 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 SFTPBP07988 381 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 COX4I1P13073 169 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 SLC6A6P31641 620 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 MDH1P40925 334 aaKnown RBP12.03□□□□□ -0.48
TUBB3-215ENST00000625617 SRSF4Q08170 494 aaKnown RBP12.03□□□□□ -0.48
TUBB3-215ENST00000625617 OR8G1Q15617 311 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 OCLNQ16625 522 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 RSPO1Q2MKA7 263 aaPredicted RBP12.03□□□□□ -0.48
TUBB3-215ENST00000625617 SLC36A3Q495N2 470 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 CD276Q5ZPR3 534 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 OLFML2AQ68BL7 652 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 OR6V1Q8N148 313 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 OR2AJ1Q8NGZ0 328 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 SLCO4A1Q96BD0 722 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 NMNAT3Q96T66 252 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 ADAT1Q9BUB4 502 aaKnown RBP12.03□□□□□ -0.48
TUBB3-215ENST00000625617 SLC22A4Q9H015 551 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 SRA1Q9HD15 236 aaKnown RBP12.03□□□□□ -0.48
TUBB3-215ENST00000625617 RPRD1BQ9NQG5 326 aaKnown RBP12.03□□□□□ -0.48
TUBB3-215ENST00000625617 C1RLQ9NZP8 487 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 ERVK-18Q9QC07 812 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 CTSZQ9UBR2 303 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 B9D1Q9UPM9 204 aa12.03□□□□□ -0.48
TUBB3-215ENST00000625617 ZNF879B4DU55 563 aa12.02□□□□□ -0.49
TUBB3-215ENST00000625617 M0R135 149 aa12.02□□□□□ -0.49
TUBB3-215ENST00000625617 LGALS8O00214 317 aa12.02□□□□□ -0.49
TUBB3-215ENST00000625617 TOX4O94842 621 aa12.02□□□□□ -0.49
TUBB3-215ENST00000625617 DIRAS1O95057 198 aa12.02□□□□□ -0.49
TUBB3-215ENST00000625617 HLA-DQA2P01906 255 aa12.02□□□□□ -0.49
TUBB3-215ENST00000625617 LIPFP07098 398 aa12.02□□□□□ -0.49
TUBB3-215ENST00000625617 MELTFP08582 738 aa12.02□□□□□ -0.49
TUBB3-215ENST00000625617 HIST1H1CP16403 213 aaKnown RBP12.02□□□□□ -0.49
TUBB3-215ENST00000625617 CA6P23280 308 aa12.02□□□□□ -0.49
TUBB3-215ENST00000625617 NOS3P29474 1203 aa12.02□□□□□ -0.49
TUBB3-215ENST00000625617 NUDT2P50583 147 aa12.02□□□□□ -0.49
TUBB3-215ENST00000625617 DBPQ10586 325 aaPredicted RBP12.02□□□□□ -0.49
TUBB3-215ENST00000625617 KRT72Q14CN4 511 aa12.02□□□□□ -0.49
TUBB3-215ENST00000625617 MPPED2Q15777 294 aa12.02□□□□□ -0.49
TUBB3-215ENST00000625617 C8orf82Q6P1X6 216 aaPredicted RBP12.02□□□□□ -0.49
TUBB3-215ENST00000625617 Q6YL49 198 aa12.02□□□□□ -0.49
TUBB3-215ENST00000625617 BOLLQ8N9W6 283 aaKnown RBP12.02□□□□□ -0.49
TUBB3-215ENST00000625617 OR4K13Q8NH42 304 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms