RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 VSIG4Q9Y279 399 aa4.78□□□□□ -1.64
CDKL5-204ENST00000623364 STARD10Q9Y365 291 aa4.78□□□□□ -1.64
CDKL5-204ENST00000623364 ZDHHC9Q9Y397 364 aa4.78□□□□□ -1.64
CDKL5-204ENST00000623364 MOB4Q9Y3A3 225 aa4.78□□□□□ -1.64
CDKL5-204ENST00000623364 MINOS1-NBL1R4GNA1 71 aa4.78□□□□□ -1.64
CDKL5-204ENST00000623364 HSPE1-MOB4S4R3N1 261 aa4.78□□□□□ -1.64
CDKL5-204ENST00000623364 ELOA3CA0A087WX78 387 aaPredicted RBP4.77□□□□□ -1.65
CDKL5-204ENST00000623364 A0A096LPI6 279 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 M0R082 166 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 UBXN8O00124 270 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 ACOT8O14734 319 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 STX11O75558 287 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 MLNP12872 115 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 HLA-DOBP13765 273 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 CTRB1P17538 263 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 ARRB2P32121 409 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 RPS5P46782 204 aaKnown RBP4.77□□□□□ -1.65
CDKL5-204ENST00000623364 ZNF84P51523 738 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 CAV3P56539 151 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 ELF3P78545 371 aaPredicted RBP4.77□□□□□ -1.65
CDKL5-204ENST00000623364 PSG4Q00888 419 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 NAB1Q13506 487 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 TIGD6Q17RP2 521 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 SPDYE7PQ495Y7 208 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 SPIN4Q56A73 249 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 RNASEH2BQ5TBB1 312 aaKnown RBP4.77□□□□□ -1.65
CDKL5-204ENST00000623364 CTRB2Q6GPI1 263 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 ZNF782Q6ZMW2 699 aaPredicted RBP4.77□□□□□ -1.65
CDKL5-204ENST00000623364 C6orf223Q8N319 242 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 GCSAMQ8N6F7 178 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 OR52L1Q8NGH7 329 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 GRK7Q8WTQ7 553 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 OIT3Q8WWZ8 545 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 TMEM54Q969K7 222 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 ZNF566Q969W8 418 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 IQCDQ96DY2 449 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 MED30Q96HR3 178 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 ALG9Q9H6U8 611 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 GNB4Q9HAV0 340 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 PAPOLBQ9NRJ5 636 aaKnown RBP4.77□□□□□ -1.65
CDKL5-204ENST00000623364 ZCCHC3Q9NUD5 404 aaKnown RBP4.77□□□□□ -1.65
CDKL5-204ENST00000623364 RLIMQ9NVW2 624 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 ETAA1Q9NY74 926 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 MRPL39Q9NYK5 338 aaKnown RBP4.77□□□□□ -1.65
CDKL5-204ENST00000623364 SLC13A4Q9UKG4 626 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 MKLN1Q9UL63 735 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 KCNE3Q9Y6H6 103 aa4.77□□□□□ -1.65
CDKL5-204ENST00000623364 LOC102724200A0A096LPH7 203 aaPredicted RBP4.76□□□□□ -1.65
CDKL5-204ENST00000623364 A0A1B0GWJ7 208 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 TCRBV7S2A1N4TA0A589 114 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 FAAHO00519 579 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 NPIPB7O75200 414 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 TIPRLO75663 272 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 OR4F21O95013 312 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 IGHG2P01859 326 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 IGHG4P01861 327 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 ETFAP13804 333 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 SELLP14151 372 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 NQO1P15559 274 aaKnown RBP4.76□□□□□ -1.65
CDKL5-204ENST00000623364 HADHBP55084 474 aaKnown RBP4.76□□□□□ -1.65
CDKL5-204ENST00000623364 KCNJ10P78508 379 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 ZNF678Q5SXM1 525 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 BEND6Q5SZJ8 279 aaPredicted RBP4.76□□□□□ -1.65
CDKL5-204ENST00000623364 TEDDM1Q5T9Z0 273 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 AP1ARQ63HQ0 302 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 OR4F3Q6IEY1 312 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 KCTD8Q6ZWB6 473 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 Q8N402 240 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 STPG3Q8N7X2 389 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 STK35Q8TDR2 534 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 CREB3L1Q96BA8 519 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 C12orf43Q96C57 262 aaKnown RBP4.76□□□□□ -1.65
CDKL5-204ENST00000623364 RNF126Q9BV68 326 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 WNT5BQ9H1J7 359 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 NUP62CLQ9H1M0 184 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 BRD7Q9NPI1 651 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 USE1Q9NZ43 259 aa4.76□□□□□ -1.65
CDKL5-204ENST00000623364 LRP1Q07954 4544 aaKnown RBP4.76□□□□□ -1.65
CDKL5-204ENST00000623364 CFAP73A6NFT4 308 aa4.75□□□□□ -1.65
CDKL5-204ENST00000623364 IQCF6A8MYZ5 107 aa4.75□□□□□ -1.65
CDKL5-204ENST00000623364 OR7A17O14581 309 aa4.75□□□□□ -1.65
CDKL5-204ENST00000623364 SLC22A2O15244 555 aa4.75□□□□□ -1.65
CDKL5-204ENST00000623364 RRP9O43818 475 aaKnown RBP4.75□□□□□ -1.65
CDKL5-204ENST00000623364 OR2T1O43869 369 aa4.75□□□□□ -1.65
CDKL5-204ENST00000623364 AK1P00568 194 aa4.75□□□□□ -1.65
CDKL5-204ENST00000623364 HPRP00739 348 aa4.75□□□□□ -1.65
CDKL5-204ENST00000623364 H2AFB1P0C5Y9 115 aa4.75□□□□□ -1.65
CDKL5-204ENST00000623364 H2AFB2P0C5Z0 115 aa4.75□□□□□ -1.65
CDKL5-204ENST00000623364 PGAM1P18669 254 aa4.75□□□□□ -1.65
CDKL5-204ENST00000623364 PSMB8P28062 276 aa4.75□□□□□ -1.65
CDKL5-204ENST00000623364 BIDP55957 195 aa4.75□□□□□ -1.65
CDKL5-204ENST00000623364 SNX1Q13596 522 aa4.75□□□□□ -1.65
CDKL5-204ENST00000623364 HES1Q14469 280 aa4.75□□□□□ -1.65
CDKL5-204ENST00000623364 MAPK14Q16539 360 aa4.75□□□□□ -1.65
CDKL5-204ENST00000623364 PCK2Q16822 640 aa4.75□□□□□ -1.65
CDKL5-204ENST00000623364 DEFB135Q30KP9 77 aa4.75□□□□□ -1.65
CDKL5-204ENST00000623364 ATPAF1Q5TC12 328 aaPredicted RBP4.75□□□□□ -1.65
CDKL5-204ENST00000623364 ATG16L1Q676U5 607 aa4.75□□□□□ -1.65
CDKL5-204ENST00000623364 FAM71E1Q6IPT2 247 aa4.75□□□□□ -1.65
CDKL5-204ENST00000623364 FBXW12Q6X9E4 464 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms