RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 PP6455Q8WZ26 134 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 ROBO4Q8WZ75 1007 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 FGGYQ96C11 551 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 NEDD4LQ96PU5 975 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 OR10A2Q9H208 303 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 RGCCQ9H4X1 137 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 ZNF552Q9H707 407 aaPredicted RBP14.4□□□□□ -0.1
LDB3-208ENST00000623007 GHRLQ9UBU3 117 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 FBLN5Q9UBX5 448 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 SLC5A6Q9Y289 635 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 RBMX2Q9Y388 322 aaKnown RBP14.4□□□□□ -0.1
LDB3-208ENST00000623007 NUBP2Q9Y5Y2 271 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 ALPK2Q86TB3 2170 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 A0A087WV48 116 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 GGT3PA6NGU5 568 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 HMX3A6NHT5 357 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 SGCEO43556 437 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 BPNT1O95861 308 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 F10P00742 488 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 IGLV3-1P01715 115 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 ITGB2P05107 769 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 FAM157BP0CG42 384 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 UBBP0CG47 229 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 ZNF24P17028 368 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 CDK2P24941 298 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 PRKXP51817 358 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 SNTB2Q13425 540 aaKnown RBP14.39□□□□□ -0.11
LDB3-208ENST00000623007 GPR176Q14439 515 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 SLC36A2Q495M3 483 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 CCDC92Q53HC0 331 aaPredicted RBP14.39□□□□□ -0.11
LDB3-208ENST00000623007 GLYATL3Q5SZD4 288 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 DNM1P46Q6ZS02 220 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 MCEMP1Q8IX19 187 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 DNAAF1Q8NEP3 725 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 OR51D1Q8NGF3 324 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 OR8B12Q8NGG6 310 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 HPS1Q92902 700 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 SCPEP1Q9HB40 452 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 ZNF107Q9UII5 783 aaPredicted RBP14.39□□□□□ -0.11
LDB3-208ENST00000623007 RAB22AQ9UL26 194 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 TRAV17A0A0B4J275 112 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 A0A1B0GTI1 187 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 OR6C6A6NF89 314 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 FAM166BA8MTA8 275 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 PROB1E7EW31 1015 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 H0YC42 278 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 M0R135 149 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 CTAG2O75638 210 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 THBS4P35443 961 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 GDNFP39905 211 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 PTH2RP49190 550 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 TNFSF10P50591 281 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 NOVA1P51513 510 aaKnown RBP14.39□□□□□ -0.11
LDB3-208ENST00000623007 CLDN12P56749 244 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 TAS2R20P59543 309 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 JAGN1Q8N5M9 183 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 OR51E1Q8TCB6 317 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 PPP1R14AQ96A00 147 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 ZNF799Q96GE5 643 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 LDAHQ9H6V9 325 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 EXO5Q9H790 373 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 ZDHHC11Q9H8X9 412 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 GPR35Q9HC97 309 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 GLRX2Q9NS18 164 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 ZNF175Q9Y473 711 aa14.39□□□□□ -0.11
LDB3-208ENST00000623007 TRGV5A0A0B4J1U4 118 aa14.38□□□□□ -0.11
LDB3-208ENST00000623007 TM4SF5O14894 197 aa14.38□□□□□ -0.11
LDB3-208ENST00000623007 RBBP9O75884 186 aa14.38□□□□□ -0.11
LDB3-208ENST00000623007 DHRS3O75911 302 aa14.38□□□□□ -0.11
LDB3-208ENST00000623007 CSF1P09603 554 aa14.38□□□□□ -0.11
LDB3-208ENST00000623007 ACTBP60709 375 aa14.38□□□□□ -0.11
LDB3-208ENST00000623007 ACTG1P63261 375 aa14.38□□□□□ -0.11
LDB3-208ENST00000623007 DGCR2P98153 550 aa14.38□□□□□ -0.11
LDB3-208ENST00000623007 KLF9Q13886 244 aaPredicted RBP14.38□□□□□ -0.11
LDB3-208ENST00000623007 ASPHD2Q6ICH7 369 aa14.38□□□□□ -0.11
LDB3-208ENST00000623007 FAM57BQ71RH2 274 aa14.38□□□□□ -0.11
LDB3-208ENST00000623007 ZNF627Q7L945 461 aa14.38□□□□□ -0.11
LDB3-208ENST00000623007 PRSS45Q7RTY3 260 aa14.38□□□□□ -0.11
LDB3-208ENST00000623007 OR2W3Q7Z3T1 314 aa14.38□□□□□ -0.11
LDB3-208ENST00000623007 PNLDC1Q8NA58 520 aaKnown RBP14.38□□□□□ -0.11
LDB3-208ENST00000623007 OR1J2Q8NGS2 313 aa14.38□□□□□ -0.11
LDB3-208ENST00000623007 SLC25A28Q96A46 364 aa14.38□□□□□ -0.11
LDB3-208ENST00000623007 GPR84Q9NQS5 396 aa14.38□□□□□ -0.11
LDB3-208ENST00000623007 NLKQ9UBE8 527 aa14.38□□□□□ -0.11
LDB3-208ENST00000623007 NCKAP5O14513 1909 aa14.38□□□□□ -0.11
LDB3-208ENST00000623007 ZNF587BE7ETH6 402 aa14.37□□□□□ -0.11
LDB3-208ENST00000623007 INMT-MINDY4F8WBC2 141 aa14.37□□□□□ -0.11
LDB3-208ENST00000623007 TFECO14948 347 aaPredicted RBP14.37□□□□□ -0.11
LDB3-208ENST00000623007 SSX4O60224 188 aa14.37□□□□□ -0.11
LDB3-208ENST00000623007 CCNKO75909 580 aa14.37□□□□□ -0.11
LDB3-208ENST00000623007 YES1P07947 543 aa14.37□□□□□ -0.11
LDB3-208ENST00000623007 CD3GP09693 182 aa14.37□□□□□ -0.11
LDB3-208ENST00000623007 SLC6A9P48067 706 aa14.37□□□□□ -0.11
LDB3-208ENST00000623007 GALK2Q01415 458 aa14.37□□□□□ -0.11
LDB3-208ENST00000623007 TGIF1Q15583 401 aa14.37□□□□□ -0.11
LDB3-208ENST00000623007 CEACAM16Q2WEN9 425 aa14.37□□□□□ -0.11
LDB3-208ENST00000623007 PLA1AQ53H76 456 aa14.37□□□□□ -0.11
LDB3-208ENST00000623007 UTS2BQ765I0 119 aa14.37□□□□□ -0.11
LDB3-208ENST00000623007 SLC16A14Q7RTX9 510 aa14.37□□□□□ -0.11
LDB3-208ENST00000623007 LYPD6Q86Y78 171 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms