RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 IGHV3OR16-9A0A0B4J2B5 98 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 A0A0J9YXV3 536 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 A0A0U1RQV1 116 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 A0A1B0GUH1 482 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 A0A1W2PP18 115 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 DNASE2O00115 360 aaPredicted RBP3.06□□□□□ -1.92
CPNE3-213ENST00000622183 NVLO15381 856 aaKnown RBP3.06□□□□□ -1.92
CPNE3-213ENST00000622183 MPDU1O75352 247 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 SEMA3DO95025 777 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 GFAPP14136 432 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 DTYMKP23919 212 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 GABRR2P28476 465 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 BMI1P35226 326 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 ATP6V0D1P61421 351 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 LCN2P80188 198 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 DGCR6Q14129 220 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 C5orf64Q2M2E5 130 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 FAM83EQ2M2I3 478 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 TCEAL5Q5H9L2 206 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 TMEM205Q6UW68 189 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 TIFABQ6ZNK6 161 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 LINC00336Q6ZUF6 198 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 ADAMTS13Q76LX8 1427 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 UNC93AQ86WB7 457 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 OR10G2Q8NGC3 310 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 OR10W1Q8NGF6 305 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 PALLDQ8WX93 1383 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 TCEAL3Q969E4 200 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 ISOC2Q96AB3 205 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 DYNLL2Q96FJ2 89 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 LINC00167Q96N53 147 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 FOPNLQ96NB1 174 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 CAMK2N2Q96S95 79 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 VCXQ9H320 206 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 PATZ1Q9HBE1 687 aaKnown RBP3.06□□□□□ -1.92
CPNE3-213ENST00000622183 MYOZ1Q9NP98 299 aaPredicted RBP3.06□□□□□ -1.92
CPNE3-213ENST00000622183 ZDHHC4Q9NPG8 344 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 SLC17A7Q9P2U7 560 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 ZNF222Q9UK12 451 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 COMMD3-BMI1R4GMX3 469 aa3.06□□□□□ -1.92
CPNE3-213ENST00000622183 KIF27Q86VH2 1401 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 MROH5Q6ZUA9 1318 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 GCM2O75603 506 aaPredicted RBP3.05□□□□□ -1.92
CPNE3-213ENST00000622183 YIF1AO95070 293 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 PSMC3P17980 439 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 GABRG2P18507 467 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 AZU1P20160 251 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 PMCHP20382 165 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 RBM34P42696 430 aaKnown RBP3.05□□□□□ -1.92
CPNE3-213ENST00000622183 PPICP45877 212 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 CDKN2DP55273 166 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 LRRC63Q05C16 580 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 LOXL1Q08397 574 aaPredicted RBP3.05□□□□□ -1.92
CPNE3-213ENST00000622183 SYCNQ0VAF6 134 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 TFDP2Q14188 446 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 TPRG1LQ5T0D9 272 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 PRMT9Q6P2P2 845 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 NTM-AS1Q6ZSK4 140 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 KIF2BQ8N4N8 673 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 PTX4Q96A99 478 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 UQCC2Q9BRT2 126 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 AGMATQ9BSE5 352 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 SLIRPQ9GZT3 109 aaKnown RBP3.05□□□□□ -1.92
CPNE3-213ENST00000622183 DDX19AQ9NUU7 478 aaKnown RBP3.05□□□□□ -1.92
CPNE3-213ENST00000622183 ZNRD1Q9P1U0 126 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 HYOU1Q9Y4L1 999 aa3.05□□□□□ -1.92
CPNE3-213ENST00000622183 NEURL4Q96JN8 1562 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 MROH7Q68CQ1 1323 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 PCDH11XQ9BZA7 1347 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 IGKV1-8A0A0C4DH67 115 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 A0A0J9YYE9 177 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 A0A1W2PPV4 95 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 CHMP2AO43633 222 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 NMT2O60551 498 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 TRBC1P01850 177 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 GLAP06280 429 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 KLK1P06870 262 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 CD37P11049 281 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 CFHR2P36980 270 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 CLDN6P56747 220 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 YWHAEP62258 255 aaKnown RBP3.04□□□□□ -1.92
CPNE3-213ENST00000622183 TSC22D1Q15714 1073 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 FAM78AQ5JUQ0 283 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 Q6ZVH6 145 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 CALHM1Q8IU99 346 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 NKAIN4Q8IVV8 208 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 CDKL3Q8IVW4 592 aaPredicted RBP3.04□□□□□ -1.92
CPNE3-213ENST00000622183 RIMKLAQ8IXN7 391 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 TMEM104Q8NE00 496 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 COQ8AQ8NI60 647 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 ZNF75CPQ92670 426 aaPredicted RBP3.04□□□□□ -1.92
CPNE3-213ENST00000622183 HAUS1Q96CS2 278 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 ZNF414Q96IQ9 312 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 HSD17B10Q99714 261 aaKnown RBP3.04□□□□□ -1.92
CPNE3-213ENST00000622183 NDFIP1Q9BT67 221 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 NAA50Q9GZZ1 169 aaKnown RBP3.04□□□□□ -1.92
CPNE3-213ENST00000622183 TMEM27Q9HBJ8 222 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 PSG11Q9UQ72 335 aa3.04□□□□□ -1.92
CPNE3-213ENST00000622183 IGHV1-69DA0A0B4J2H0 117 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 SLC16A7O60669 478 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms