RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 BCL2L10Q9HD36 194 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 EXOSC3Q9NQT5 275 aaKnown RBP10.28□□□□□ -0.76
CLIP1-219ENST00000620786 PURGQ9UJV8 347 aaKnown RBP10.28□□□□□ -0.76
CLIP1-219ENST00000620786 COPS3Q9UNS2 423 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 CDK5RAP2Q96SN8 1893 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 HMX2A2RU54 273 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 IMPA2O14732 288 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 GPR37O15354 613 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 CNR1P21554 472 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 NME2P22392 152 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 TESK1Q15569 626 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 ACSM5Q6NUN0 579 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 APOBEC3DQ96AK3 386 aaPredicted RBP10.28□□□□□ -0.76
CLIP1-219ENST00000620786 C19orf43Q9BQ61 176 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 EVPLQ92817 2033 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 TRGV10A0A0A0MS01 117 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 ZNF816-ZNF321PA0A0X1KG74 233 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 SPAARA0A1B0GVQ0 90 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 RPS27P42677 84 aaKnown RBP10.28□□□□□ -0.76
CLIP1-219ENST00000620786 CCR6P51684 374 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 ZNF266Q14584 549 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 AGERQ15109 404 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 PRSS45Q7RTY3 260 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 ZFP82Q8N141 532 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 TMEM104Q8NE00 496 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 JAM3Q9BX67 310 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 LHX9Q9NQ69 397 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 SLC25A37Q9NYZ2 338 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 PUS1Q9Y606 427 aaKnown RBP eCLIP10.28□□□□□ -0.76
CLIP1-219ENST00000620786 WDR1O75083 606 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 PCK2Q16822 640 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 PWWP2BQ6NUJ5 590 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 OCIAD1Q9NX40 245 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 A0A087WUJ7 227 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 ALG1L2C9J202 215 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 TRAF3IP2O43734 574 aaPredicted RBP10.28□□□□□ -0.76
CLIP1-219ENST00000620786 TMIGD3P0DMS9 266 aaPredicted RBP10.28□□□□□ -0.76
CLIP1-219ENST00000620786 SSTP61278 116 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 NCCRP1Q6ZVX7 275 aaPredicted RBP10.28□□□□□ -0.76
CLIP1-219ENST00000620786 TSEN54Q7Z6J9 526 aaKnown RBP10.28□□□□□ -0.76
CLIP1-219ENST00000620786 MYOZ1Q9NP98 299 aaPredicted RBP10.28□□□□□ -0.76
CLIP1-219ENST00000620786 OR2A25A4D2G3 310 aa10.27□□□□□ -0.76
CLIP1-219ENST00000620786 ARPC3O15145 178 aa10.27□□□□□ -0.76
CLIP1-219ENST00000620786 PPP3CBP16298 524 aa10.27□□□□□ -0.76
CLIP1-219ENST00000620786 SOX8P57073 446 aa10.27□□□□□ -0.76
CLIP1-219ENST00000620786 UBE2KP61086 200 aa10.27□□□□□ -0.76
CLIP1-219ENST00000620786 ERHP84090 104 aaKnown RBP10.27□□□□□ -0.76
CLIP1-219ENST00000620786 SLC25A26Q70HW3 274 aa10.27□□□□□ -0.76
CLIP1-219ENST00000620786 THNSL2Q86YJ6 484 aa10.27□□□□□ -0.76
CLIP1-219ENST00000620786 APOBEC4Q8WW27 367 aaKnown RBP10.27□□□□□ -0.76
CLIP1-219ENST00000620786 GATA6Q92908 595 aa10.27□□□□□ -0.76
CLIP1-219ENST00000620786 UBE2FQ969M7 185 aa10.27□□□□□ -0.76
CLIP1-219ENST00000620786 ALOX5APP20292 161 aa10.27□□□□□ -0.77
CLIP1-219ENST00000620786 ELLP55199 621 aaPredicted RBP10.27□□□□□ -0.77
CLIP1-219ENST00000620786 SFTPA1Q8IWL2 248 aa10.27□□□□□ -0.77
CLIP1-219ENST00000620786 FCRL1Q96LA6 429 aa10.27□□□□□ -0.77
CLIP1-219ENST00000620786 COMMD5Q9GZQ3 224 aa10.27□□□□□ -0.77
CLIP1-219ENST00000620786 SMCO4Q9NRQ5 59 aa10.27□□□□□ -0.77
CLIP1-219ENST00000620786 PMS2P2O95744 297 aa10.27□□□□□ -0.77
CLIP1-219ENST00000620786 AQP6Q13520 282 aa10.27□□□□□ -0.77
CLIP1-219ENST00000620786 SLC17A1Q14916 467 aa10.27□□□□□ -0.77
CLIP1-219ENST00000620786 ZNF391Q9UJN7 358 aa10.27□□□□□ -0.77
CLIP1-219ENST00000620786 CHST2Q9Y4C5 530 aa10.27□□□□□ -0.77
CLIP1-219ENST00000620786 I6L893 689 aaPredicted RBP10.27□□□□□ -0.77
CLIP1-219ENST00000620786 POU3F3P20264 500 aaPredicted RBP10.27□□□□□ -0.77
CLIP1-219ENST00000620786 DUSP1P28562 367 aa10.27□□□□□ -0.77
CLIP1-219ENST00000620786 MNX1P50219 401 aaPredicted RBP10.27□□□□□ -0.77
CLIP1-219ENST00000620786 ZNF117Q03924 483 aa10.27□□□□□ -0.77
CLIP1-219ENST00000620786 HFEQ30201 348 aa10.27□□□□□ -0.77
CLIP1-219ENST00000620786 OR1F12Q8NHA8 337 aa10.27□□□□□ -0.77
CLIP1-219ENST00000620786 KTI12Q96EK9 354 aaPredicted RBP10.27□□□□□ -0.77
CLIP1-219ENST00000620786 ZNF486Q96H40 463 aaPredicted RBP10.27□□□□□ -0.77
CLIP1-219ENST00000620786 SAV1Q9H4B6 383 aaPredicted RBP10.27□□□□□ -0.77
CLIP1-219ENST00000620786 LIN7CQ9NUP9 197 aaKnown RBP10.27□□□□□ -0.77
CLIP1-219ENST00000620786 MAGEB4O15481 346 aaPredicted RBP10.26□□□□□ -0.77
CLIP1-219ENST00000620786 SPRY1O43609 319 aaPredicted RBP10.26□□□□□ -0.77
CLIP1-219ENST00000620786 RAF1P04049 648 aa10.26□□□□□ -0.77
CLIP1-219ENST00000620786 UBE2IP63279 158 aaKnown RBP10.26□□□□□ -0.77
CLIP1-219ENST00000620786 CCDC71Q8IV32 467 aaPredicted RBP10.26□□□□□ -0.77
CLIP1-219ENST00000620786 OR51S1Q8NGJ8 323 aa10.26□□□□□ -0.77
CLIP1-219ENST00000620786 SEH1LQ96EE3 360 aa10.26□□□□□ -0.77
CLIP1-219ENST00000620786 TAAR6Q96RI8 345 aa10.26□□□□□ -0.77
CLIP1-219ENST00000620786 SLCO1C1Q9NYB5 712 aa10.26□□□□□ -0.77
CLIP1-219ENST00000620786 ING1Q9UK53 422 aaPredicted RBP10.26□□□□□ -0.77
CLIP1-219ENST00000620786 SLC22A13Q9Y226 551 aa10.26□□□□□ -0.77
CLIP1-219ENST00000620786 POM121CA8CG34 1229 aa10.26□□□□□ -0.77
CLIP1-219ENST00000620786 CDC14BO60729 498 aa10.26□□□□□ -0.77
CLIP1-219ENST00000620786 DFFBO76075 338 aa10.26□□□□□ -0.77
CLIP1-219ENST00000620786 HPP00738 406 aa10.26□□□□□ -0.77
CLIP1-219ENST00000620786 APEX1P27695 318 aaKnown RBP10.26□□□□□ -0.77
CLIP1-219ENST00000620786 ZNF85Q03923 595 aa10.26□□□□□ -0.77
CLIP1-219ENST00000620786 RAB35Q15286 201 aa10.26□□□□□ -0.77
CLIP1-219ENST00000620786 C15orf54Q8N8G6 183 aa10.26□□□□□ -0.77
CLIP1-219ENST00000620786 TMEM129A0AVI4 362 aa10.26□□□□□ -0.77
CLIP1-219ENST00000620786 ZXDAP98168 799 aa10.26□□□□□ -0.77
CLIP1-219ENST00000620786 FZD5Q13467 585 aa10.26□□□□□ -0.77
CLIP1-219ENST00000620786 HIST2H3PS2Q5TEC6 136 aa10.26□□□□□ -0.77
CLIP1-219ENST00000620786 TMEM108Q6UXF1 575 aa10.26□□□□□ -0.77
CLIP1-219ENST00000620786 SMRP1Q8NCR6 262 aa10.26□□□□□ -0.77
CLIP1-219ENST00000620786 ZNF75AQ96N20 296 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms