RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 ZNF837Q96EG3 531 aaPredicted RBP13.92□□□□□ -0.18
CD40-207ENST00000620709 SORCS2Q96PQ0 1159 aa13.92□□□□□ -0.18
CD40-207ENST00000620709 OR2M2Q96R28 347 aa13.92□□□□□ -0.18
CD40-207ENST00000620709 INTS14Q96SY0 518 aa13.92□□□□□ -0.18
CD40-207ENST00000620709 MNTQ99583 582 aa13.92□□□□□ -0.18
CD40-207ENST00000620709 RTTNQ86VV8 2226 aa13.91□□□□□ -0.18
CD40-207ENST00000620709 TVP23AA6NH52 213 aa13.91□□□□□ -0.18
CD40-207ENST00000620709 ZNF670-ZNF695F2Z2N8 137 aa13.91□□□□□ -0.18
CD40-207ENST00000620709 H3BMQ9 156 aa13.91□□□□□ -0.18
CD40-207ENST00000620709 ZNF432O94892 652 aa13.91□□□□□ -0.18
CD40-207ENST00000620709 IFNA2P01563 188 aa13.91□□□□□ -0.18
CD40-207ENST00000620709 HLA-DQA2P01906 255 aa13.91□□□□□ -0.18
CD40-207ENST00000620709 CSF3P09919 207 aa13.91□□□□□ -0.18
CD40-207ENST00000620709 USF1P22415 310 aaPredicted RBP13.91□□□□□ -0.18
CD40-207ENST00000620709 CALCRP30988 508 aa13.91□□□□□ -0.18
CD40-207ENST00000620709 PDLIM4P50479 330 aa13.91□□□□□ -0.18
CD40-207ENST00000620709 FMODQ06828 376 aa13.91□□□□□ -0.18
CD40-207ENST00000620709 ACSM1Q08AH1 577 aa13.91□□□□□ -0.18
CD40-207ENST00000620709 CAMK2DQ13557 499 aa13.91□□□□□ -0.18
CD40-207ENST00000620709 DOC2BQ14184 412 aa13.91□□□□□ -0.18
CD40-207ENST00000620709 SLC16A12Q6ZSM3 486 aa13.91□□□□□ -0.18
CD40-207ENST00000620709 SPRYD4Q8WW59 207 aaPredicted RBP13.91□□□□□ -0.18
CD40-207ENST00000620709 BOD1Q96IK1 185 aa13.91□□□□□ -0.18
CD40-207ENST00000620709 YIPF3Q9GZM5 350 aa13.91□□□□□ -0.18
CD40-207ENST00000620709 NELFAQ9H3P2 528 aa13.91□□□□□ -0.18
CD40-207ENST00000620709 COL6A5A8TX70 2615 aa13.91□□□□□ -0.18
CD40-207ENST00000620709 ARFGEF3Q5TH69 2177 aa13.9□□□□□ -0.18
CD40-207ENST00000620709 A0A096LNT2 108 aa13.9□□□□□ -0.18
CD40-207ENST00000620709 MT-ND5P03915 603 aa13.9□□□□□ -0.18
CD40-207ENST00000620709 PAX7P23759 505 aa13.9□□□□□ -0.18
CD40-207ENST00000620709 BDH1Q02338 343 aa13.9□□□□□ -0.18
CD40-207ENST00000620709 ADIPOQQ15848 244 aa13.9□□□□□ -0.18
CD40-207ENST00000620709 TIMM50Q3ZCQ8 353 aa13.9□□□□□ -0.18
CD40-207ENST00000620709 PHYHD1Q5SRE7 291 aa13.9□□□□□ -0.18
CD40-207ENST00000620709 CYB5R2Q6BCY4 276 aa13.9□□□□□ -0.18
CD40-207ENST00000620709 MDP1Q86V88 176 aa13.9□□□□□ -0.18
CD40-207ENST00000620709 MYPOPQ86VE0 399 aaPredicted RBP13.9□□□□□ -0.18
CD40-207ENST00000620709 SYS1Q8N2H4 156 aa13.9□□□□□ -0.18
CD40-207ENST00000620709 OR6N2Q8NGY6 317 aa13.9□□□□□ -0.18
CD40-207ENST00000620709 UFD1Q92890 307 aa13.9□□□□□ -0.18
CD40-207ENST00000620709 NMD3Q96D46 503 aaKnown RBP13.9□□□□□ -0.18
CD40-207ENST00000620709 PIMREGQ9BSJ6 248 aa13.9□□□□□ -0.18
CD40-207ENST00000620709 WDR76Q9H967 626 aa13.9□□□□□ -0.18
CD40-207ENST00000620709 CRNNQ9UBG3 495 aaPredicted RBP13.9□□□□□ -0.18
CD40-207ENST00000620709 COA3Q9Y2R0 106 aaPredicted RBP13.9□□□□□ -0.18
CD40-207ENST00000620709 TMEM14AQ9Y6G1 99 aa13.9□□□□□ -0.18
CD40-207ENST00000620709 VSTM5A8MXK1 200 aa13.9□□□□□ -0.19
CD40-207ENST00000620709 B9A039 149 aa13.9□□□□□ -0.19
CD40-207ENST00000620709 RPL36A-HNRNPH2H7BZ11 118 aa13.9□□□□□ -0.19
CD40-207ENST00000620709 PHYHO14832 338 aa13.9□□□□□ -0.19
CD40-207ENST00000620709 CD79AP11912 226 aa13.9□□□□□ -0.19
CD40-207ENST00000620709 HOXB1P14653 301 aaPredicted RBP13.9□□□□□ -0.19
CD40-207ENST00000620709 CBR1P16152 277 aa13.9□□□□□ -0.19
CD40-207ENST00000620709 CPEP16870 476 aa13.9□□□□□ -0.19
CD40-207ENST00000620709 ZNF16P17020 682 aaPredicted RBP13.9□□□□□ -0.19
CD40-207ENST00000620709 THBS4P35443 961 aa13.9□□□□□ -0.19
CD40-207ENST00000620709 HCCSP53701 268 aa13.9□□□□□ -0.19
CD40-207ENST00000620709 SSX1Q16384 188 aa13.9□□□□□ -0.19
CD40-207ENST00000620709 CDONQ4KMG0 1287 aa13.9□□□□□ -0.19
CD40-207ENST00000620709 SSX6Q7RTT6 188 aa13.9□□□□□ -0.19
CD40-207ENST00000620709 OR6N1Q8NGY5 312 aa13.9□□□□□ -0.19
CD40-207ENST00000620709 SNX33Q8WV41 574 aa13.9□□□□□ -0.19
CD40-207ENST00000620709 C4orf36Q96KX1 117 aa13.9□□□□□ -0.19
CD40-207ENST00000620709 B3GAT2Q9NPZ5 323 aa13.9□□□□□ -0.19
CD40-207ENST00000620709 TRIM36Q9NQ86 728 aa13.9□□□□□ -0.19
CD40-207ENST00000620709 NDUFB11Q9NX14 153 aa13.9□□□□□ -0.19
CD40-207ENST00000620709 COPS3Q9UNS2 423 aa13.9□□□□□ -0.19
CD40-207ENST00000620709 MXRA5Q9NR99 2828 aa13.89□□□□□ -0.19
CD40-207ENST00000620709 ZNF503-AS2A6NEH8 195 aa13.89□□□□□ -0.19
CD40-207ENST00000620709 IGLV1-44P01699 117 aa13.89□□□□□ -0.19
CD40-207ENST00000620709 GADD45AP24522 165 aa13.89□□□□□ -0.19
CD40-207ENST00000620709 CSNK1A1P48729 337 aa13.89□□□□□ -0.19
CD40-207ENST00000620709 TAS2R43P59537 309 aa13.89□□□□□ -0.19
CD40-207ENST00000620709 TPBGQ13641 420 aa13.89□□□□□ -0.19
CD40-207ENST00000620709 CTF1Q16619 201 aa13.89□□□□□ -0.19
CD40-207ENST00000620709 HIST3H3Q16695 136 aa13.89□□□□□ -0.19
CD40-207ENST00000620709 LIPKQ5VXJ0 399 aa13.89□□□□□ -0.19
CD40-207ENST00000620709 PHC2Q8IXK0 858 aa13.89□□□□□ -0.19
CD40-207ENST00000620709 ALDH16A1Q8IZ83 802 aa13.89□□□□□ -0.19
CD40-207ENST00000620709 TMEM123Q8N131 208 aa13.89□□□□□ -0.19
CD40-207ENST00000620709 RFLNBQ8N5W9 214 aa13.89□□□□□ -0.19
CD40-207ENST00000620709 BEX2Q9BXY8 128 aa13.89□□□□□ -0.19
CD40-207ENST00000620709 ISG20L2Q9H9L3 353 aaKnown RBP13.89□□□□□ -0.19
CD40-207ENST00000620709 MOV10Q9HCE1 1003 aaKnown RBP13.89□□□□□ -0.19
CD40-207ENST00000620709 MRPL22Q9NWU5 206 aaKnown RBP13.89□□□□□ -0.19
CD40-207ENST00000620709 BABAM2Q9NXR7 383 aa13.89□□□□□ -0.19
CD40-207ENST00000620709 PTTG2Q9NZH5 202 aa13.89□□□□□ -0.19
CD40-207ENST00000620709 LAMP5Q9UJQ1 280 aa13.89□□□□□ -0.19
CD40-207ENST00000620709 CUBNO60494 3623 aa13.89□□□□□ -0.19
CD40-207ENST00000620709 IGKV1D-43A0A0B4J1Z2 117 aa13.88□□□□□ -0.19
CD40-207ENST00000620709 RNF212BA8MTL3 300 aa13.88□□□□□ -0.19
CD40-207ENST00000620709 J3QLW9 94 aa13.88□□□□□ -0.19
CD40-207ENST00000620709 SLC22A1O15245 554 aa13.88□□□□□ -0.19
CD40-207ENST00000620709 AIREO43918 545 aa13.88□□□□□ -0.19
CD40-207ENST00000620709 GPANK1O95872 356 aa13.88□□□□□ -0.19
CD40-207ENST00000620709 IGKV3-15P01624 115 aa13.88□□□□□ -0.19
CD40-207ENST00000620709 HLA-HP01893 362 aa13.88□□□□□ -0.19
CD40-207ENST00000620709 IGHV4-31P0DP07 118 aa13.88□□□□□ -0.19
CD40-207ENST00000620709 GAAP10253 952 aa13.88□□□□□ -0.19
CD40-207ENST00000620709 ZNF19P17023 458 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms