RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 VSX1Q9NZR4 365 aaPredicted RBP9.39□□□□□ -0.91
TARDBP-221ENST00000619555 ASH2LQ9UBL3 628 aa9.39□□□□□ -0.91
TARDBP-221ENST00000619555 ZNF69Q9UC07 566 aa9.39□□□□□ -0.91
TARDBP-221ENST00000619555 COA3Q9Y2R0 106 aaPredicted RBP9.39□□□□□ -0.91
TARDBP-221ENST00000619555 AP4S1Q9Y587 144 aa9.39□□□□□ -0.91
TARDBP-221ENST00000619555 OR6C6A6NF89 314 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 WIPF1O43516 503 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 AHCYL1O43865 530 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 E2F6O75461 281 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 KHDRBS3O75525 346 aaKnown RBP9.38□□□□□ -0.91
TARDBP-221ENST00000619555 GPANK1O95872 356 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 ZNF12P17014 697 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 TNFRSF1AP19438 455 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 TUBG1P23258 451 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 BTG1P62324 171 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 ZNF154Q13106 437 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 AQP6Q13520 282 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 HLXQ14774 488 aaPredicted RBP9.38□□□□□ -0.91
TARDBP-221ENST00000619555 TUSC1Q2TAM9 212 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 TMEM155Q4W5P6 130 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 SLC35F1Q5T1Q4 408 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 OR2T2Q6IF00 324 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 CD300LDQ6UXZ3 194 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 KLHL36Q8N4N3 616 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 IQCF1Q8N6M8 205 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 ATG16L2Q8NAA4 619 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 SDR9C7Q8NEX9 313 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 OR4K13Q8NH42 304 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 OR1F12Q8NHA8 337 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 ZMYND19Q96E35 227 aaPredicted RBP9.38□□□□□ -0.91
TARDBP-221ENST00000619555 DUX5Q96PT3 197 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 OR2V2Q96R30 315 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 NMNAT3Q96T66 252 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 DDOQ99489 341 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 NDEL1Q9GZM8 345 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 NUAK2Q9H093 628 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 TUBG2Q9NRH3 451 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 TBC1D23Q9NUY8 699 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 PTTG3PQ9NZH4 202 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 IL19Q9UHD0 177 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 NUP50Q9UKX7 468 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 PPP1R3CQ9UQK1 317 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 POLR3KQ9Y2Y1 108 aaPredicted RBP9.38□□□□□ -0.91
TARDBP-221ENST00000619555 INSIG2Q9Y5U4 225 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 AUP1Q9Y679 476 aa9.38□□□□□ -0.91
TARDBP-221ENST00000619555 CMYA5Q8N3K9 4069 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 IGHV3-64DA0A0J9YX35 117 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 OR6C68A6NDL8 312 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 F5H0A9 414 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-221ENST00000619555 H0YL77 283 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 TMEM178BH3BS89 294 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 RER1O15258 196 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 ZNF205O95201 554 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 RAC2P15153 192 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 DAPP51397 102 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 MMP16P51512 607 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 LSM6P62312 80 aaKnown RBP9.37□□□□□ -0.91
TARDBP-221ENST00000619555 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.37□□□□□ -0.91
TARDBP-221ENST00000619555 SLC36A3Q495N2 470 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 ARMCX4Q5H9R4 360 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 RPL13AP3Q6NVV1 102 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 LEG1Q6P5S2 330 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 RBMS3Q6XE24 437 aaKnown RBP9.37□□□□□ -0.91
TARDBP-221ENST00000619555 DOK3Q7L591 496 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-221ENST00000619555 ADCK1Q86TW2 530 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 GLB1L2Q8IW92 636 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 OR6V1Q8N148 313 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 LNX2Q8N448 690 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 OR52L1Q8NGH7 329 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 OR52E2Q8NGJ4 325 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 OR5K1Q8NHB7 308 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 SGMS2Q8NHU3 365 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 ZNF420Q8TAQ5 688 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-221ENST00000619555 ZNRF4Q8WWF5 429 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 ZNF48Q96MX3 618 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-221ENST00000619555 TSSK6Q9BXA6 273 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 SEMA6AQ9H2E6 1030 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 GCM1Q9NP62 436 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 PCDHGB1Q9Y5G3 927 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 SOX21Q9Y651 276 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-221ENST00000619555 MEGF8Q7Z7M0 2845 aa9.37□□□□□ -0.91
TARDBP-221ENST00000619555 IGHV3OR16-10A0A075B7F0 116 aa9.36□□□□□ -0.91
TARDBP-221ENST00000619555 IGLV1-36A0A0B4J1U3 117 aa9.36□□□□□ -0.91
TARDBP-221ENST00000619555 CEACAM18A8MTB9 384 aa9.36□□□□□ -0.91
TARDBP-221ENST00000619555 A8MXK9 166 aa9.36□□□□□ -0.91
TARDBP-221ENST00000619555 ANKRD65E5RJM6 399 aa9.36□□□□□ -0.91
TARDBP-221ENST00000619555 SURF4O15260 269 aa9.36□□□□□ -0.91
TARDBP-221ENST00000619555 CYB5R3P00387 301 aaPredicted RBP9.36□□□□□ -0.91
TARDBP-221ENST00000619555 WNT2P09544 360 aa9.36□□□□□ -0.91
TARDBP-221ENST00000619555 HKR1P10072 659 aa9.36□□□□□ -0.91
TARDBP-221ENST00000619555 PRTN3P24158 256 aa9.36□□□□□ -0.91
TARDBP-221ENST00000619555 FASP25445 335 aa9.36□□□□□ -0.91
TARDBP-221ENST00000619555 CD80P33681 288 aa9.36□□□□□ -0.91
TARDBP-221ENST00000619555 MDH2P40926 338 aaKnown RBP9.36□□□□□ -0.91
TARDBP-221ENST00000619555 CENPAP49450 140 aa9.36□□□□□ -0.91
TARDBP-221ENST00000619555 COX10Q12887 443 aa9.36□□□□□ -0.91
TARDBP-221ENST00000619555 KCNMB1Q16558 191 aa9.36□□□□□ -0.91
TARDBP-221ENST00000619555 MEP1BQ16820 701 aa9.36□□□□□ -0.91
TARDBP-221ENST00000619555 FAHD1Q6P587 224 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms