RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 A0A087WUJ7 227 aa9.7□□□□□ -0.86
UPF3A-212ENST00000619079 URADA6NGE7 173 aa9.7□□□□□ -0.86
UPF3A-212ENST00000619079 DCTN6O00399 190 aa9.7□□□□□ -0.86
UPF3A-212ENST00000619079 LDLRAD4O15165 306 aa9.7□□□□□ -0.86
UPF3A-212ENST00000619079 KLF8O95600 359 aaPredicted RBP9.7□□□□□ -0.86
UPF3A-212ENST00000619079 CMPK1P30085 196 aa9.7□□□□□ -0.86
UPF3A-212ENST00000619079 GABRA3P34903 492 aa9.7□□□□□ -0.86
UPF3A-212ENST00000619079 GRK6P43250 576 aa9.7□□□□□ -0.86
UPF3A-212ENST00000619079 RELQ04864 619 aaPredicted RBP9.7□□□□□ -0.86
UPF3A-212ENST00000619079 DMWDQ09019 674 aa9.7□□□□□ -0.86
UPF3A-212ENST00000619079 BIKQ13323 160 aa9.7□□□□□ -0.86
UPF3A-212ENST00000619079 ODF4Q2M2E3 257 aa9.7□□□□□ -0.86
UPF3A-212ENST00000619079 EMC4Q5J8M3 183 aa9.7□□□□□ -0.86
UPF3A-212ENST00000619079 TMEM268Q5VZI3 342 aa9.7□□□□□ -0.86
UPF3A-212ENST00000619079 RPL7L1Q6DKI1 246 aaKnown RBP9.7□□□□□ -0.86
UPF3A-212ENST00000619079 KIRREL2Q6UWL6 708 aa9.7□□□□□ -0.86
UPF3A-212ENST00000619079 HEPN1Q6WQI6 88 aa9.7□□□□□ -0.86
UPF3A-212ENST00000619079 ERN2Q76MJ5 926 aaKnown RBP9.7□□□□□ -0.86
UPF3A-212ENST00000619079 DTWD2Q8NBA8 298 aa9.7□□□□□ -0.86
UPF3A-212ENST00000619079 ACBD4Q8NC06 268 aa9.7□□□□□ -0.86
UPF3A-212ENST00000619079 OR9K2Q8NGE7 335 aa9.7□□□□□ -0.86
UPF3A-212ENST00000619079 FAM174AQ8TBP5 190 aa9.7□□□□□ -0.86
UPF3A-212ENST00000619079 SCGB3A2Q96PL1 93 aa9.7□□□□□ -0.86
UPF3A-212ENST00000619079 C2orf88Q9BSF0 95 aa9.7□□□□□ -0.86
UPF3A-212ENST00000619079 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.7□□□□□ -0.86
UPF3A-212ENST00000619079 ELOA3CA0A087WX78 387 aaPredicted RBP9.69□□□□□ -0.86
UPF3A-212ENST00000619079 A0A0A6YYC8 382 aaPredicted RBP9.69□□□□□ -0.86
UPF3A-212ENST00000619079 UMAD1C9J7I0 102 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 I3L1I5 382 aaPredicted RBP9.69□□□□□ -0.86
UPF3A-212ENST00000619079 YIF1AO95070 293 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 C5AR1P21730 350 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 SNCAP37840 140 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 KIR2DL1P43626 348 aaPredicted RBP9.69□□□□□ -0.86
UPF3A-212ENST00000619079 UCP2P55851 309 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 RAP1AP62834 184 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 MRPS21P82921 87 aaKnown RBP9.69□□□□□ -0.86
UPF3A-212ENST00000619079 FAM3AP98173 230 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 SKP2Q13309 424 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 GUK1Q16774 197 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 OPN5Q6U736 354 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 HOGA1Q86XE5 327 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 RHOVQ96L33 236 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 C2orf50Q96LR7 162 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 CCNL2Q96S94 520 aaPredicted RBP9.69□□□□□ -0.86
UPF3A-212ENST00000619079 SERINC2Q96SA4 455 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 INTS14Q96SY0 518 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 CMKLR1Q99788 373 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 PBDC1Q9BVG4 233 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 NRSN2Q9GZP1 204 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 OR5AC2Q9NZP5 309 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 GTF2A1LQ9UNN4 478 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 TECTAO75443 2155 aa9.69□□□□□ -0.86
UPF3A-212ENST00000619079 OR10H2O60403 315 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 SFT2D2O95562 160 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 TXNDC12O95881 172 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 HOXB2P14652 356 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 NTSR1P30989 418 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 HRH1P35367 487 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 SLC26A5P58743 744 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 CHAF1BQ13112 559 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 EBPQ15125 230 aaKnown RBP9.68□□□□□ -0.86
UPF3A-212ENST00000619079 TOMM34Q15785 309 aaPredicted RBP9.68□□□□□ -0.86
UPF3A-212ENST00000619079 ZNF260Q3ZCT1 412 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 TMPPEQ6ZT21 453 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 NKAIN3Q8N8D7 197 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 ARSGQ96EG1 525 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 MEGF10Q96KG7 1140 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 TMEM68Q96MH6 324 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 ZMAT3Q9HA38 289 aaKnown RBP9.68□□□□□ -0.86
UPF3A-212ENST00000619079 KCNJ16Q9NPI9 418 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 RAB22AQ9UL26 194 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 KCNK6Q9Y257 313 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 HIF3AQ9Y2N7 669 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 COL4A2P08572 1712 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 A0A1B0GWJ7 208 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 FITM1A5D6W6 292 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 IFITM10A6NMD0 228 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 GPR89AB7ZAQ6 455 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 PRAMEF26H0Y7S4 382 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 ADAM10O14672 748 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 OR2C1O95371 312 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 RENP00797 406 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 GPR89BP0CG08 455 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 ZNF888P0CJ79 500 aaPredicted RBP9.68□□□□□ -0.86
UPF3A-212ENST00000619079 ST6GAL1P15907 406 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 IGFBP3P17936 291 aaPredicted RBP9.68□□□□□ -0.86
UPF3A-212ENST00000619079 ZNF10P21506 573 aaPredicted RBP9.68□□□□□ -0.86
UPF3A-212ENST00000619079 IGFALSP35858 605 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 RPS10P46783 165 aaKnown RBP9.68□□□□□ -0.86
UPF3A-212ENST00000619079 EMDP50402 254 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 ACTBL2Q562R1 376 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 DPY19L4Q7Z388 723 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 OR4N5Q8IXE1 308 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 FAM46BQ96A09 425 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 MARS2Q96GW9 593 aaKnown RBP9.68□□□□□ -0.86
UPF3A-212ENST00000619079 TSSK2Q96PF2 358 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 OR8B4Q96RC9 309 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 RAB33BQ9H082 229 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 SLC35B3Q9H1N7 401 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 SMDT1Q9H4I9 107 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms