RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 C4orf36Q96KX1 117 aa13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 YTHDF1Q9BYJ9 559 aaKnown RBP13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 POFUT1Q9H488 388 aa13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 ISG20L2Q9H9L3 353 aaKnown RBP13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 UBTD1Q9HAC8 227 aa13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 ACOXLQ9NUZ1 547 aa13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 BLOC1S6Q9UL45 172 aa13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 VSTM5A8MXK1 200 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 HS3ST1O14792 307 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 TBX1O43435 398 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 RGS10O43665 173 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 PNPP00491 289 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 PRF1P14222 555 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 PSMA6P60900 246 aaKnown RBP13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 RPS23P62266 143 aaKnown RBP13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 ACTA2P62736 377 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 ACTG2P63267 376 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 MFGE8Q08431 387 aaPredicted RBP13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 MSMPQ1L6U9 139 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 ZNF829Q3KNS6 432 aaPredicted RBP13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 SNAI3Q3KNW1 292 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 OR2G6Q5TZ20 316 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 RGS7BPQ6MZT1 257 aaPredicted RBP13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 TMPRSS11AQ6ZMR5 421 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 PRSS45Q7RTY3 260 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 SYS1Q8N2H4 156 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 KLHL36Q8N4N3 616 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 OR5L1Q8NGL2 311 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 SPRYD4Q8WW59 207 aaPredicted RBP13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 PPP1R14AQ96A00 147 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 PGAM5Q96HS1 289 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 SIGLEC11Q96RL6 698 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 DHRS9Q9BPW9 319 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 OR2J1Q9GZK6 312 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 CCDC90BQ9GZT6 254 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 ZNF442Q9H7R0 627 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 SP140LQ9H930 580 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 FAM206AQ9NX38 181 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 ZNF319Q9P2F9 582 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 FZR1Q9UM11 496 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 GTF2A1LQ9UNN4 478 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 LRCH1Q9Y2L9 728 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 CAB39Q9Y376 341 aaPredicted RBP13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 CMAHPQ9Y471 501 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 R4GMQ9 66 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 PTPN13Q12923 2485 aa13.44□□□□□ -0.26
PCDHGC3-204ENST00000617222 UTP20O75691 2785 aaKnown RBP13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 LOC110117498-PIK3R3F6TDL0 507 aa13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 J3QW42 95 aa13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 SRSF10O75494 262 aaKnown RBP13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 ATE1O95260 518 aa13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 MT-ND2P03891 347 aa13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 OR4A8P0C604 315 aa13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 APOBEC3AP31941 199 aaPredicted RBP13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 MMP16P51512 607 aa13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 EGFL6Q8IUX8 553 aa13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 C1orf174Q8IYL3 243 aa13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 GATAD2BQ8WXI9 593 aa13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 RORBQ92753 470 aa13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 FBXW5Q969U6 566 aa13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 PELI1Q96FA3 418 aa13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 MARS2Q96GW9 593 aaKnown RBP13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 COG8Q96MW5 612 aa13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 CDCA4Q9BXL8 241 aa13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 PBOV1Q9GZY1 135 aa13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 OR10A2Q9H208 303 aa13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 PLEKHF2Q9H8W4 249 aa13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 PTTG3PQ9NZH4 202 aa13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 ERGIC3Q9Y282 383 aa13.43□□□□□ -0.26
PCDHGC3-204ENST00000617222 ACOD1A6NK06 481 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 MT-ND5P03915 603 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 TUBG1P23258 451 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 GCH1P30793 250 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 SERPINF1P36955 418 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 MPV17P39210 176 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 KRTAP10-9P60411 292 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 MALLQ13021 153 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 HLXQ14774 488 aaPredicted RBP13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 ADIPOQQ15848 244 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 ZNF718Q3SXZ3 478 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 GLYATL3Q5SZD4 288 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 RNLSQ5VYX0 342 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 ZNF544Q6NX49 715 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 PRSS48Q7RTY5 328 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 LRP11Q86VZ4 500 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 FBXL14Q8N1E6 418 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 NANOGP1Q8N7R0 232 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 OR8B12Q8NGG6 310 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 OR52H1Q8NGJ2 320 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 OR52N1Q8NH53 320 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 OR2AE1Q8NHA4 323 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 KLF14Q8TD94 323 aaPredicted RBP13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 RNF166Q96A37 237 aaPredicted RBP13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 SGK3Q96BR1 496 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 CMBLQ96DG6 245 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 G6PC2Q9NQR9 355 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 TUBG2Q9NRH3 451 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 DUSP13Q9UII6 198 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 OR52A1Q9UKL2 312 aa13.42□□□□□ -0.26
PCDHGC3-204ENST00000617222 SNX5Q9Y5X3 404 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms