RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 CD82P27701 267 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 TALDO1P37837 337 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 PITPNBP48739 271 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 BCAP31P51572 246 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 CCR9P51686 369 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 DGCR2P98153 550 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 ZNF774Q6NX45 483 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 GPR137CQ8N3F9 429 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 JAGN1Q8N5M9 183 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 ZFP62Q8NB50 900 aaPredicted RBP6.85□□□□□ -1.31
NEK3-207ENST00000617054 NPRL2Q8WTW4 380 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 ACOT12Q8WYK0 555 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 CPNE4Q96A23 557 aaPredicted RBP6.85□□□□□ -1.31
NEK3-207ENST00000617054 SLC25A38Q96DW6 304 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 SLITRK2Q9H156 845 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 AUNIPQ9H7T9 357 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 SLC7A10Q9NS82 523 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 HHLA2Q9UM44 414 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 NCOR2Q9Y618 2525 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 MED12LQ86YW9 2145 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 CYTIPO60759 359 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 MRPL33O75394 65 aaKnown RBP6.84□□□□□ -1.31
NEK3-207ENST00000617054 MAPK3P27361 379 aaPredicted RBP6.84□□□□□ -1.31
NEK3-207ENST00000617054 SCN1BQ07699 218 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 ODF1Q14990 250 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 POU4F3Q15319 338 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 GLYATL3Q5SZD4 288 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 TRIQKQ629K1 86 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 FDX2Q6P4F2 183 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 NUFIP2Q7Z417 695 aaKnown RBP6.84□□□□□ -1.31
NEK3-207ENST00000617054 FGD2Q7Z6J4 655 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 BIVMQ86UB2 503 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 GCNT2Q8N0V5 402 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 DRAXINQ8NBI3 349 aaPredicted RBP6.84□□□□□ -1.31
NEK3-207ENST00000617054 OR1J2Q8NGS2 313 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 OR2AE1Q8NHA4 323 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 THAP7Q9BT49 309 aaPredicted RBP6.84□□□□□ -1.31
NEK3-207ENST00000617054 ZCCHC4Q9H5U6 513 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 ZMAT3Q9HA38 289 aaKnown RBP6.84□□□□□ -1.31
NEK3-207ENST00000617054 GPR84Q9NQS5 396 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 MEIS3P1A6NDR6 274 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 SLC19A2O60779 497 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 CFL1P23528 166 aaKnown RBP6.84□□□□□ -1.31
NEK3-207ENST00000617054 HGFACQ04756 655 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 CDC20Q12834 499 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 CCDC92Q53HC0 331 aaPredicted RBP6.84□□□□□ -1.31
NEK3-207ENST00000617054 SKA3Q8IX90 412 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 GDPD1Q8N9F7 314 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 C19orf18Q8NEA5 215 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 OR13C9Q8NGT0 318 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 SF3B5Q9BWJ5 86 aaKnown RBP6.84□□□□□ -1.31
NEK3-207ENST00000617054 SPATA2Q9UM82 520 aa6.84□□□□□ -1.31
NEK3-207ENST00000617054 PCDHGA9Q9Y5G4 932 aaKnown RBP6.84□□□□□ -1.31
NEK3-207ENST00000617054 TRGV5A0A0B4J1U4 118 aa6.84□□□□□ -1.32
NEK3-207ENST00000617054 ISPDA4D126 451 aa6.84□□□□□ -1.32
NEK3-207ENST00000617054 KDM4BO94953 1096 aa6.84□□□□□ -1.32
NEK3-207ENST00000617054 HNRNPCP07910 306 aaKnown RBP eCLIP6.84□□□□□ -1.32
NEK3-207ENST00000617054 ZNF32P17041 273 aa6.84□□□□□ -1.32
NEK3-207ENST00000617054 CCNOP22674 350 aa6.84□□□□□ -1.32
NEK3-207ENST00000617054 KIR2DL3P43628 341 aa6.84□□□□□ -1.32
NEK3-207ENST00000617054 DEFA1P59665 94 aa6.84□□□□□ -1.32
NEK3-207ENST00000617054 DEFA3P59666 94 aa6.84□□□□□ -1.32
NEK3-207ENST00000617054 SNAI3Q3KNW1 292 aa6.84□□□□□ -1.32
NEK3-207ENST00000617054 C2orf76Q3KRA6 126 aa6.84□□□□□ -1.32
NEK3-207ENST00000617054 C10orf128Q5T292 105 aa6.84□□□□□ -1.32
NEK3-207ENST00000617054 ABLIM2Q6H8Q1 611 aa6.84□□□□□ -1.32
NEK3-207ENST00000617054 HDDC2Q7Z4H3 204 aa6.84□□□□□ -1.32
NEK3-207ENST00000617054 OR52N4Q8NGI2 321 aa6.84□□□□□ -1.32
NEK3-207ENST00000617054 ITFG2Q969R8 447 aa6.84□□□□□ -1.32
NEK3-207ENST00000617054 FAM46BQ96A09 425 aa6.84□□□□□ -1.32
NEK3-207ENST00000617054 NLKQ9UBE8 527 aa6.84□□□□□ -1.32
NEK3-207ENST00000617054 KLK11Q9UBX7 282 aa6.84□□□□□ -1.32
NEK3-207ENST00000617054 ELF5Q9UKW6 265 aaPredicted RBP6.84□□□□□ -1.32
NEK3-207ENST00000617054 CDV3Q9UKY7 258 aaKnown RBP6.84□□□□□ -1.32
NEK3-207ENST00000617054 MRPS18CQ9Y3D5 142 aaKnown RBP6.84□□□□□ -1.32
NEK3-207ENST00000617054 GTF3C1Q12789 2109 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 A0A1B0GTI1 187 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 MEIOCA2RUB1 952 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 PDCD5O14737 125 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 TMEM127O75204 238 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 CDK2P24941 298 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 INPP1P49441 399 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 ZNF84P51523 738 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 FAPQ12884 760 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 FAAP20Q6NZ36 180 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 CHMP1BQ7LBR1 199 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 ELMOD2Q8IZ81 293 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 MEIOBQ8N635 442 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 GJC3Q8NFK1 279 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 RFT1Q96AA3 541 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 KCTD12Q96CX2 325 aaKnown RBP6.83□□□□□ -1.32
NEK3-207ENST00000617054 FOXB1Q99853 325 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 NEURL2Q9BR09 285 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 SCNM1Q9BWG6 230 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 GPR35Q9HC97 309 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 NBASA2RRP1 2371 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 COL12A1Q99715 3063 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 TLN1Q9Y490 2541 aaKnown RBP6.83□□□□□ -1.32
NEK3-207ENST00000617054 A0A1W2PR80 420 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 ZNF503-AS2A6NEH8 195 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 187.6 ms