RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.81□□□□□ -0.52
MSH6-214ENST00000616033 OR8U1Q8NH10 309 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 RNASE11Q8TAA1 199 aaKnown RBP11.81□□□□□ -0.52
MSH6-214ENST00000616033 NICN1Q9BSH3 213 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 MYO7BQ6PIF6 2116 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 IGKV1D-42A0A075B6H8 117 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 WISP1O95388 367 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 MPIG6BO95866 241 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 MBP02144 154 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 PRH1P02810 166 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 ZNF735P0CB33 412 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 S1PR1P21453 382 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 FHITP49789 147 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 ASCL1P50553 236 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 RNF4P78317 190 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 ARFRP1Q13795 201 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 TOMM34Q15785 309 aaPredicted RBP11.8□□□□□ -0.52
MSH6-214ENST00000616033 ZNF684Q5T5D7 378 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 DHRS11Q6UWP2 260 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 TIPARPQ7Z3E1 657 aaKnown RBP11.8□□□□□ -0.52
MSH6-214ENST00000616033 PRRT1Q99946 306 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 OR8D2Q9GZM6 311 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 PTGES2Q9H7Z7 377 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 ELL3Q9HB65 397 aaPredicted RBP11.8□□□□□ -0.52
MSH6-214ENST00000616033 SMCO4Q9NRQ5 59 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 PNO1Q9NRX1 252 aaKnown RBP11.8□□□□□ -0.52
MSH6-214ENST00000616033 PCNX3Q9H6A9 2034 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 UNC13CQ8NB66 2214 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 A0A1W2PPE2 198 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 C2orf72A6NCS6 295 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 COLCA2A8K830 154 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 LILRB3O75022 631 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 C1QL1O75973 258 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 S100A2P29034 98 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 IGFALSP35858 605 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 CLDN6P56747 220 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 C1orf61Q13536 156 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 ZNF74Q16587 644 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 MED25Q71SY5 747 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 GPR119Q8TDV5 335 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 OR1E3Q8WZA6 343 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 TAAR8Q969N4 342 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 MARS2Q96GW9 593 aaKnown RBP11.8□□□□□ -0.52
MSH6-214ENST00000616033 C14orf144Q96I85 54 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 STACQ99469 402 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 APOOQ9BUR5 198 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 NUDT9Q9BW91 350 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 TEX101Q9BY14 249 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 NMNAT2Q9BZQ4 307 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 RAB33BQ9H082 229 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 TAF9BQ9HBM6 251 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 SPACA1Q9HBV2 294 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 RCC2Q9P258 522 aaKnown RBP11.8□□□□□ -0.52
MSH6-214ENST00000616033 FBXO7Q9Y3I1 522 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 A0A1B0GTI1 187 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 A0A1W2PP11 408 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 ARPC3O15145 178 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 SLC17A1Q14916 467 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 TOMM20Q15388 145 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 OR2A2Q6IF42 318 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 ETFRF1Q6IPR1 90 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 PTCRAQ6ISU1 281 aaPredicted RBP11.8□□□□□ -0.52
MSH6-214ENST00000616033 ADGRE4PQ86SQ3 457 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 FAM160A2Q8N612 972 aaPredicted RBP11.8□□□□□ -0.52
MSH6-214ENST00000616033 OR4K15Q8NH41 348 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 C16orf52Q8NHV5 167 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 ASB5Q8WWX0 329 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 GTF3AQ92664 365 aaKnown RBP11.8□□□□□ -0.52
MSH6-214ENST00000616033 MMP26Q9NRE1 261 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 MMP24Q9Y5R2 645 aa11.8□□□□□ -0.52
MSH6-214ENST00000616033 PUS1Q9Y606 427 aaKnown RBP eCLIP11.8□□□□□ -0.52
MSH6-214ENST00000616033 CXCR1P25024 350 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 ARRB1P49407 418 aaPredicted RBP11.79□□□□□ -0.52
MSH6-214ENST00000616033 FMODQ06828 376 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 SURF2Q15527 256 aaPredicted RBP11.79□□□□□ -0.52
MSH6-214ENST00000616033 BCORP1Q8N888 145 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 ZNF426Q9BUY5 554 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 SEC11CQ9BY50 192 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 MFRPQ9BY79 579 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 OR11A1Q9GZK7 315 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 CRLF2Q9HC73 371 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 COA3Q9Y2R0 106 aaPredicted RBP11.79□□□□□ -0.52
MSH6-214ENST00000616033 SPTBN5Q9NRC6 3674 aaKnown RBP11.79□□□□□ -0.52
MSH6-214ENST00000616033 A0A087X0M5 115 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 TRBV5-7A0A0A0MS05 114 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 LOC107986453A0A1B0GWG9 222 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 A0A1B0GX30 115 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 NKX2-2O95096 273 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 CNOT4O95628 575 aaKnown RBP11.79□□□□□ -0.52
MSH6-214ENST00000616033 QDPRP09417 244 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 FBP1P09467 338 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 RPS10P46783 165 aaKnown RBP11.79□□□□□ -0.52
MSH6-214ENST00000616033 MGAT2Q10469 447 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 ZNF345Q14585 488 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 RSU1Q15404 277 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 AWAT1Q58HT5 328 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 DRAM2Q6UX65 266 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 MISPQ8IVT2 679 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 ZNF679Q8IYX0 411 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 OR52N4Q8NGI2 321 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms