RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 A3GALT2U3KPV4 340 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 MIA3Q5JRA6 1907 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 HMX3A6NHT5 357 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 LIFP15018 202 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 TNFRSF1AP19438 455 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 F2RL1P55085 397 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 SRPXP78539 464 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 NLRC3Q7RTR2 1065 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 SCCPDHQ8NBX0 429 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 OR6X1Q8NH79 312 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 ST7LQ8TDW4 575 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 SECTM1Q8WVN6 248 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 TSNAXQ99598 290 aaKnown RBP8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 CHRNA10Q9GZZ6 450 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 ING1Q9UK53 422 aaPredicted RBP8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 ARID1BQ8NFD5 2236 aaPredicted RBP8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 TRBV5-3A0A0A0MS03 114 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 IGHV1-45A0A0A0MS14 117 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 LRP5LA4QPB2 252 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 DNPH1O43598 174 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 IFNA1P01562 189 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 CLEC2LP0C7M8 214 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 ZNF17P17021 662 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 THBS4P35443 961 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 TAS2R20P59543 309 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 TMEM108Q6UXF1 575 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 LAX1Q8IWV1 398 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 OR2M3Q8NG83 312 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 PP6455Q8WZ26 134 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 MCHR2Q969V1 340 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 PSD2Q9BQI7 771 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 OR51J1Q9H342 316 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 PLK3Q9H4B4 646 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 NECAP2Q9NVZ3 263 aa8.46□□□□□ -1.05
CLTCL1-208ENST00000615606 DLL1O00548 723 aa8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 CTXN2P0C2S0 81 aa8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 ZNF728P0DKX0 622 aa8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 OPRM1P35372 400 aa8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 HTR2BP41595 481 aa8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 ZNF92Q03936 586 aa8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 ESCO2Q56NI9 601 aa8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 TSPAN32Q96QS1 320 aa8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 BANF2Q9H503 90 aa8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 ESRP2Q9H6T0 727 aaKnown RBP8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 RLFQ13129 1914 aa8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 LIPT2A6NK58 231 aa8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 CEBPZOSA8MTT3 80 aa8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 ENSAO43768 121 aaKnown RBP8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 APOC3P02656 99 aa8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 GSTP1P09211 210 aaKnown RBP8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 ZNF83P51522 516 aa8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 SKP2Q13309 424 aa8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 DEGS2Q6QHC5 323 aa8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 TFAP2EQ6VUC0 442 aa8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 CISD2Q8N5K1 135 aaKnown RBP8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 OR2T35Q8NGX2 323 aa8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 UPRTQ96BW1 309 aa8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 UBL7Q96S82 380 aaPredicted RBP8.46□□□□□ -1.06
CLTCL1-208ENST00000615606 TMEM82A0PJX8 343 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 MT-CO2P00403 227 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 IFI6P09912 130 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 FUT6P51993 359 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 CDC20Q12834 499 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 DESI1Q6ICB0 168 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 IDO2Q6ZQW0 420 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 NUFIP2Q7Z417 695 aaKnown RBP8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 DMBX1Q8NFW5 382 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 FBXO17Q96EF6 278 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 KCNJ16Q9NPI9 418 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 HS3ST1O14792 307 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 IFNA17P01571 189 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 HLA-AP01891 365 aaKnown RBP8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 TFP02787 698 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 NGFRP08138 427 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 CEACAM1P13688 526 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 NFYBP25208 207 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 PTBP1P26599 531 aaKnown RBP eCLIP8.45□□□□□ -1.065e-9■■■■■ 31.2
CLTCL1-208ENST00000615606 AGFG1P52594 562 aaKnown RBP8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 DLX5P56178 289 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 FMODQ06828 376 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 TPBGQ13641 420 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 USF2Q15853 346 aaPredicted RBP8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 RDH10Q8IZV5 341 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 DEFB108BQ8NET1 73 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 MSI2Q96DH6 328 aaKnown RBP8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 MMP28Q9H239 520 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 ACKR4Q9NPB9 350 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 AMDHD2Q9Y303 409 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 LRP12Q9Y561 859 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 ZDBF2Q9HCK1 2354 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 ZNF705EA8MWA4 302 aaPredicted RBP8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 MAGEB4O15481 346 aaPredicted RBP8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 EPHA2P29317 976 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 STEAP1BQ6NZ63 245 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 FBXW12Q6X9E4 464 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 SLC30A7Q8NEW0 376 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 OR56B4Q8NH76 319 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 SLC25A46Q96AG3 418 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 SCPEP1Q9HB40 452 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 TMEFF2Q9UIK5 374 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms