RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 PYCARD-AS1I3L0S3 204 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 TIMM8AO60220 97 aaPredicted RBP8□□□□□ -1.13
PDLIM5-222ENST00000615540 ALOX5APP20292 161 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 PRKACBP22694 351 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 OMGP23515 440 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 LUMP51884 338 aaPredicted RBP8□□□□□ -1.13
PDLIM5-222ENST00000615540 DSCR4P56555 118 aaPredicted RBP8□□□□□ -1.13
PDLIM5-222ENST00000615540 SPEM2Q0P670 501 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 C3AR1Q16581 482 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 SUMF1Q8NBK3 374 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 OR5T1Q8NG75 326 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 OR1J2Q8NGS2 313 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 OR10AC1Q8NH08 325 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 ZNF768Q9H5H4 540 aaKnown RBP8□□□□□ -1.13
PDLIM5-222ENST00000615540 ENY2Q9NPA8 101 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 CYSLTR2Q9NS75 346 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 KIAA0100Q14667 2235 aaKnown RBP8□□□□□ -1.13
PDLIM5-222ENST00000615540 PTPRDP23468 1912 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 EPPINO95925 133 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 PDGFBP01127 241 aaPredicted RBP8□□□□□ -1.13
PDLIM5-222ENST00000615540 ADRA2AP08913 450 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 FAM157BP0CG42 384 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 M6PRP20645 277 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 ADH6P28332 368 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 RFX2P48378 723 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 RAP2BP61225 183 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 DMKNQ6E0U4 476 aaPredicted RBP8□□□□□ -1.13
PDLIM5-222ENST00000615540 FAM109AQ8N4B1 249 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 APH1AQ96BI3 265 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 SYT3Q9BQG1 590 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 SUCNR1Q9BXA5 334 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 TINAGL1Q9GZM7 467 aaPredicted RBP8□□□□□ -1.13
PDLIM5-222ENST00000615540 PARP12Q9H0J9 701 aaKnown RBP8□□□□□ -1.13
PDLIM5-222ENST00000615540 FAM234AQ9H0X4 552 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 RALYQ9UKM9 306 aaKnown RBP8□□□□□ -1.13
PDLIM5-222ENST00000615540 ZNF175Q9Y473 711 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 VCANP13611 3396 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 PTP4A3O75365 173 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 BGLAPP02818 100 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 MC2RQ01718 297 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 C20orf196Q8IYI0 205 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 PSMF1Q92530 271 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 EDEM2Q9BV94 578 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 RGCCQ9H4X1 137 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 CRLF2Q9HC73 371 aa8□□□□□ -1.13
PDLIM5-222ENST00000615540 F8W036 122 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 TMIGD3P0DMS9 266 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 RAB6AP20340 208 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 TUBG1P23258 451 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 BLOC1S1P78537 153 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 BRICD5Q6PL45 260 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 WDR74Q6RFH5 385 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 ADGRG3Q86Y34 549 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 OR2AE1Q8NHA4 323 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 ZFAND1Q8TCF1 268 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 ST8SIA4Q92187 359 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 ABHD1Q96SE0 405 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 EXOSC3Q9NQT5 275 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 IFNA5P01569 189 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 UBBP0CG47 229 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 ZNF728P0DKX0 622 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 CD53P19397 219 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 GALNSP34059 522 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 RPS27AP62979 156 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 UBA52P62987 128 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 ELFN2Q5R3F8 820 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 GLYATL2Q8WU03 294 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 LIPHQ8WWY8 451 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 ZC3HAV1LQ96H79 300 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 FER1L6-AS2Q96M78 137 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 B3GALT5Q9Y2C3 310 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 RAB27BO00194 218 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 PHF1O43189 567 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 MED6O75586 246 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 RAF1P04049 648 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 S100A9P06702 114 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 OR8U9P0C7N5 309 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 CSF2RBP32927 897 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 EIF5AL1Q6IS14 154 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 DHRS13Q6UX07 377 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 LILRB2Q8N423 598 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 CT55Q8WUE5 264 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 CNTNAP3BQ96NU0 1288 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 ARPC5LQ9BPX5 153 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 AIFM2Q9BRQ8 373 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 ZNF2Q9BSG1 426 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.99□□□□□ -1.131e-6■■■■■ 27
PDLIM5-222ENST00000615540 KLRC4-KLRK1H3BQV0 150 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 SNAPC5O75971 98 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 ZIC2O95409 532 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 OR1C1Q15619 314 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 DEFB109BQ30KR1 87 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 LSMEM1Q8N8F7 131 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 OR51F2Q8NH61 342 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 SULT4A1Q9BR01 284 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 DOCK4Q8N1I0 1966 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 H3BMH7 237 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 XRCC3O43542 346 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 ANGPTL7O43827 346 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 PMS2P2O95744 297 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms