RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 RAD51DO75771 328 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 LYZL6O75951 148 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 RPP14O95059 124 aaKnown RBP9.95□□□□□ -0.82
SLIRP-212ENST00000613856 APOC1P02654 83 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 CELP19835 753 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 GALP22466 123 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 HSD11B1P28845 292 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 PSMB10P40306 273 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 GDI2P50395 445 aaKnown RBP9.95□□□□□ -0.82
SLIRP-212ENST00000613856 NANOS3P60323 173 aaKnown RBP9.95□□□□□ -0.82
SLIRP-212ENST00000613856 PSG4Q00888 419 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 ALKBH1Q13686 389 aaKnown RBP9.95□□□□□ -0.82
SLIRP-212ENST00000613856 TAF13Q15543 124 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 HIKESHIQ53FT3 197 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 SFRP5Q5T4F7 317 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 GPR107Q5VW38 600 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 ZNF774Q6NX45 483 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 CD200R1LQ6Q8B3 271 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 ARL9Q6T311 187 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 GDPGP1Q6ZNW5 385 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 CXorf67Q86X51 503 aaPredicted RBP9.95□□□□□ -0.82
SLIRP-212ENST00000613856 CATSPERDQ86XM0 798 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 ZFP41Q8N8Y5 198 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 RELL2Q8NC24 303 aaPredicted RBP9.95□□□□□ -0.82
SLIRP-212ENST00000613856 OR2G2Q8NGZ5 317 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 OR1F12Q8NHA8 337 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 CA5BP1Q8WTZ4 195 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 HSD17B8Q92506 261 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 SPTSSAQ969W0 71 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 ISOC1Q96CN7 298 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 KCNJ15Q99712 375 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 MDFIQ99750 246 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 CXXC4Q9H2H0 198 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 SLC17A5Q9NRA2 495 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 FAM206AQ9NX38 181 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 B3GNT2Q9NY97 397 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 FBXL3Q9UKT7 428 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 STUB1Q9UNE7 303 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 TRBV2A0A0J9YWF9 115 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 ZNF503-AS2A6NEH8 195 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 TMEM212A6NML5 194 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 OR4C45A6NMZ5 311 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 LOC110117498-PIK3R3F6TDL0 507 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 PNPP00491 289 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 HLA-HP01893 362 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 BMP5P22003 454 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 PAX7P23759 505 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 GADD45AP24522 165 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 HOXC12P31275 282 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 KIR3DL2P43630 455 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 RPS25P62851 125 aaKnown RBP9.94□□□□□ -0.82
SLIRP-212ENST00000613856 MFGE8Q08431 387 aaPredicted RBP9.94□□□□□ -0.82
SLIRP-212ENST00000613856 GSG1Q2KHT4 349 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 PABPC1L2AQ5JQF8 200 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 WDR38Q5JTN6 314 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 STAC2Q6ZMT1 411 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 BHLHA15Q7RTS1 189 aaPredicted RBP9.94□□□□□ -0.82
SLIRP-212ENST00000613856 ALDH16A1Q8IZ83 802 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 PRSS35Q8N3Z0 413 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 MS4A15Q8N5U1 240 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 IL17RDQ8NFM7 739 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 DGCR14Q96DF8 476 aaKnown RBP9.94□□□□□ -0.82
SLIRP-212ENST00000613856 USB1Q9BQ65 265 aaKnown RBP9.94□□□□□ -0.82
SLIRP-212ENST00000613856 HDHD5Q9BXW7 423 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 NAA50Q9GZZ1 169 aaKnown RBP9.94□□□□□ -0.82
SLIRP-212ENST00000613856 OR10A4Q9H209 315 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 RNF121Q9H920 327 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 NOX3Q9HBY0 568 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 MOV10Q9HCE1 1003 aaKnown RBP9.94□□□□□ -0.82
SLIRP-212ENST00000613856 G6PC2Q9NQR9 355 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 ELOVL5Q9NYP7 299 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 FRRS1LQ9P0K9 344 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 RSL24D1Q9UHA3 163 aaKnown RBP9.94□□□□□ -0.82
SLIRP-212ENST00000613856 NUFIP1Q9UHK0 495 aaKnown RBP9.94□□□□□ -0.82
SLIRP-212ENST00000613856 AMDHD2Q9Y303 409 aa9.94□□□□□ -0.82
SLIRP-212ENST00000613856 FN1P02751 2386 aaKnown RBP9.94□□□□□ -0.82
SLIRP-212ENST00000613856 RTTNQ86VV8 2226 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 PNMA8CA0A1B0GUJ8 204 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 TMEM269A0A1B0GVZ9 245 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 TRDV1A0A1B0GX56 115 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 TRIM64BA6NI03 449 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 EEF1E1-BLOC1S5C9J1V9 151 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 EEF1E1O43324 174 aaKnown RBP9.93□□□□□ -0.82
SLIRP-212ENST00000613856 AIREO43918 545 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 SC5DO75845 299 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 ZFPL1O95159 310 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 HLA-DPB1P04440 258 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 PATE4P0C8F1 98 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 CD79AP11912 226 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 IL32P24001 234 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 CHRNB4P30926 498 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 CRYBB2P43320 205 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 HTR5AP47898 357 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 CX3CR1P49238 355 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 UBE2NP61088 152 aaKnown RBP9.93□□□□□ -0.82
SLIRP-212ENST00000613856 RAB1AP62820 205 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 SLC3A1Q07837 685 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 SNTB1Q13884 538 aaKnown RBP9.93□□□□□ -0.82
SLIRP-212ENST00000613856 CTF1Q16619 201 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 RSPO1Q2MKA7 263 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms