RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 CCDC58Q4VC31 144 aa12.7□□□□□ -0.38
CD48-203ENST00000613788 FDX2Q6P4F2 183 aa12.7□□□□□ -0.38
CD48-203ENST00000613788 FAM57BQ71RH2 274 aa12.7□□□□□ -0.38
CD48-203ENST00000613788 ZNF485Q8NCK3 441 aa12.7□□□□□ -0.38
CD48-203ENST00000613788 ABHD4Q8TB40 342 aa12.7□□□□□ -0.38
CD48-203ENST00000613788 PGAM5Q96HS1 289 aa12.7□□□□□ -0.38
CD48-203ENST00000613788 OR10A2Q9H208 303 aa12.7□□□□□ -0.38
CD48-203ENST00000613788 ACOT13Q9NPJ3 140 aa12.7□□□□□ -0.38
CD48-203ENST00000613788 POU2F3Q9UKI9 436 aa12.7□□□□□ -0.38
CD48-203ENST00000613788 OR52A1Q9UKL2 312 aa12.7□□□□□ -0.38
CD48-203ENST00000613788 GTF2A1LQ9UNN4 478 aa12.7□□□□□ -0.38
CD48-203ENST00000613788 RNF115Q9Y4L5 304 aa12.7□□□□□ -0.38
CD48-203ENST00000613788 A6NNC1 897 aa12.69□□□□□ -0.38
CD48-203ENST00000613788 VSTM5A8MXK1 200 aa12.69□□□□□ -0.38
CD48-203ENST00000613788 ATP6V1G2-DDX39BF2Z307 99 aa12.69□□□□□ -0.38
CD48-203ENST00000613788 SIAH2O43255 324 aa12.69□□□□□ -0.38
CD48-203ENST00000613788 SMPD2O60906 423 aa12.69□□□□□ -0.38
CD48-203ENST00000613788 SRSF10O75494 262 aaKnown RBP12.69□□□□□ -0.38
CD48-203ENST00000613788 PNPP00491 289 aa12.69□□□□□ -0.38
CD48-203ENST00000613788 NGFP01138 241 aa12.69□□□□□ -0.38
CD48-203ENST00000613788 RPSAP08865 295 aaKnown RBP12.69□□□□□ -0.38
CD48-203ENST00000613788 FAM157BP0CG42 384 aa12.69□□□□□ -0.38
CD48-203ENST00000613788 SLC2A1P11166 492 aa12.69□□□□□ -0.38
CD48-203ENST00000613788 BDH1Q02338 343 aa12.69□□□□□ -0.38
CD48-203ENST00000613788 ACSM1Q08AH1 577 aa12.69□□□□□ -0.38
CD48-203ENST00000613788 MALLQ13021 153 aa12.69□□□□□ -0.38
CD48-203ENST00000613788 BCL2L15Q5TBC7 163 aa12.69□□□□□ -0.38
CD48-203ENST00000613788 RPL22L1Q6P5R6 122 aaKnown RBP12.69□□□□□ -0.38
CD48-203ENST00000613788 PRSS45Q7RTY3 260 aa12.69□□□□□ -0.38
CD48-203ENST00000613788 ZNF101Q8IZC7 436 aa12.69□□□□□ -0.38
CD48-203ENST00000613788 NUP37Q8NFH4 326 aa12.69□□□□□ -0.38
CD48-203ENST00000613788 FCGR1BQ92637 280 aa12.69□□□□□ -0.38
CD48-203ENST00000613788 PBOV1Q9GZY1 135 aa12.69□□□□□ -0.38
CD48-203ENST00000613788 VCX3AQ9NNX9 186 aa12.69□□□□□ -0.38
CD48-203ENST00000613788 NUFIP1Q9UHK0 495 aaKnown RBP12.69□□□□□ -0.38
CD48-203ENST00000613788 LSM2Q9Y333 95 aaKnown RBP12.69□□□□□ -0.38
CD48-203ENST00000613788 TBX1O43435 398 aa12.68□□□□□ -0.38
CD48-203ENST00000613788 LCKP06239 509 aa12.68□□□□□ -0.38
CD48-203ENST00000613788 GLRXP35754 106 aa12.68□□□□□ -0.38
CD48-203ENST00000613788 CCR9P51686 369 aa12.68□□□□□ -0.38
CD48-203ENST00000613788 PPP1CBP62140 327 aa12.68□□□□□ -0.38
CD48-203ENST00000613788 RPS23P62266 143 aaKnown RBP12.68□□□□□ -0.38
CD48-203ENST00000613788 MFGE8Q08431 387 aaPredicted RBP12.68□□□□□ -0.38
CD48-203ENST00000613788 SPOCK1Q08629 439 aa12.68□□□□□ -0.38
CD48-203ENST00000613788 SNTB2Q13425 540 aaKnown RBP12.68□□□□□ -0.38
CD48-203ENST00000613788 ALKBH1Q13686 389 aaKnown RBP12.68□□□□□ -0.38
CD48-203ENST00000613788 ADAM5Q6NVV9 412 aa12.68□□□□□ -0.38
CD48-203ENST00000613788 ZNF367Q7RTV3 350 aa12.68□□□□□ -0.38
CD48-203ENST00000613788 CATSPERDQ86XM0 798 aa12.68□□□□□ -0.38
CD48-203ENST00000613788 OR1J1Q8NGS3 322 aa12.68□□□□□ -0.38
CD48-203ENST00000613788 OR2G2Q8NGZ5 317 aa12.68□□□□□ -0.38
CD48-203ENST00000613788 OR5M11Q96RB7 305 aa12.68□□□□□ -0.38
CD48-203ENST00000613788 TMEM204Q9BSN7 226 aa12.68□□□□□ -0.38
CD48-203ENST00000613788 OR51B6Q9H340 312 aa12.68□□□□□ -0.38
CD48-203ENST00000613788 ISYNA1Q9NPH2 558 aa12.68□□□□□ -0.38
CD48-203ENST00000613788 G6PC2Q9NQR9 355 aa12.68□□□□□ -0.38
CD48-203ENST00000613788 PLEKHB1Q9UF11 243 aaPredicted RBP12.68□□□□□ -0.38
CD48-203ENST00000613788 ZNF391Q9UJN7 358 aa12.68□□□□□ -0.38
CD48-203ENST00000613788 STARD10Q9Y365 291 aa12.68□□□□□ -0.38
CD48-203ENST00000613788 ATP23Q9Y6H3 246 aa12.68□□□□□ -0.38
CD48-203ENST00000613788 TRBV2A0A0J9YWF9 115 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 SHISA9B4DS77 424 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 E9PI62 339 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 XRCC2O43543 280 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 ATE1O95260 518 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 PCMT1P22061 227 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 LOXP28300 417 aaPredicted RBP12.67□□□□□ -0.38
CD48-203ENST00000613788 GTF2A1P52655 376 aaPredicted RBP12.67□□□□□ -0.38
CD48-203ENST00000613788 NKX6-1P78426 367 aaPredicted RBP12.67□□□□□ -0.38
CD48-203ENST00000613788 SNAI3Q3KNW1 292 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 UBE2UQ5VVX9 321 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 ZNF704Q6ZNC4 412 aaPredicted RBP12.67□□□□□ -0.38
CD48-203ENST00000613788 KCTD8Q6ZWB6 473 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 RFPL4BQ6ZWI9 263 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 ELMOD2Q8IZ81 293 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 OR8B12Q8NGG6 310 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 RNF166Q96A37 237 aaPredicted RBP12.67□□□□□ -0.38
CD48-203ENST00000613788 RGCCQ9H4X1 137 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 FRRS1LQ9P0K9 344 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 COL12A1Q99715 3063 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 PRR14LQ5THK1 2151 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 A0A0U1RQV5 110 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 OGG1O15527 345 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 LALBAP00709 142 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 HSMCR30P0CW71 290 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 ATP6V1B1P15313 513 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 CFL1P23528 166 aaKnown RBP12.67□□□□□ -0.38
CD48-203ENST00000613788 NANOS3P60323 173 aaKnown RBP12.67□□□□□ -0.38
CD48-203ENST00000613788 TIGD6Q17RP2 521 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 WDR38Q5JTN6 314 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 RGS7BPQ6MZT1 257 aaPredicted RBP12.67□□□□□ -0.38
CD48-203ENST00000613788 PRSS35Q8N3Z0 413 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 KBTBD8Q8NFY9 601 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 AKAP1Q92667 903 aaKnown RBP eCLIP12.67□□□□□ -0.38
CD48-203ENST00000613788 PPP1R14AQ96A00 147 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 HS3ST6Q96QI5 342 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 MGLLQ99685 303 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 COMMD4Q9H0A8 199 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 OPA3Q9H6K4 179 aa12.67□□□□□ -0.38
CD48-203ENST00000613788 ZNF319Q9P2F9 582 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms