RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 PTAFRP25105 342 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 MRPL19P49406 292 aaKnown RBP9.76□□□□□ -0.85
FAM3A-221ENST00000612856 PRPS1P60891 318 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 SPOCK1Q08629 439 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 TSEN54Q7Z6J9 526 aaKnown RBP9.76□□□□□ -0.85
FAM3A-221ENST00000612856 D2HGDHQ8N465 521 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 OR1S2Q8NGQ3 325 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 SYNPRQ8TBG9 265 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 SPACA5Q96QH8 159 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 OR14A2Q96R54 314 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 PDCD1LG2Q9BQ51 273 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 PIGQQ9BRB3 760 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 GSN-AS1Q9NRJ2 163 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 UFSP2Q9NUQ7 469 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 ZNF701Q9NV72 531 aaPredicted RBP9.76□□□□□ -0.85
FAM3A-221ENST00000612856 COA3Q9Y2R0 106 aaPredicted RBP9.76□□□□□ -0.85
FAM3A-221ENST00000612856 FAM96BQ9Y3D0 163 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 LAMA1P25391 3075 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 GALR2O43603 387 aaPredicted RBP9.75□□□□□ -0.85
FAM3A-221ENST00000612856 GCM2O75603 506 aaPredicted RBP9.75□□□□□ -0.85
FAM3A-221ENST00000612856 RAD51DO75771 328 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 GPANK1O95872 356 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 IGHG1P01857 330 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 GIPP09681 153 aaPredicted RBP9.75□□□□□ -0.85
FAM3A-221ENST00000612856 CPT2P23786 658 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 MAGEB1P43366 347 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 OR3A2P47893 321 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 CRYBA2P53672 197 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 SNTB1Q13884 538 aaKnown RBP9.75□□□□□ -0.85
FAM3A-221ENST00000612856 ALKBH6Q3KRA9 238 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 OR4Q3Q8NH05 313 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 ST7LQ8TDW4 575 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 UBQLN3Q9H347 655 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 ELOVL3Q9HB03 270 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 FOXJ2Q9P0K8 574 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 ZNF337Q9Y3M9 751 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 TMEM184BQ9Y519 407 aaPredicted RBP9.75□□□□□ -0.85
FAM3A-221ENST00000612856 A0A0B4J2A0 478 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 SYT7O43581 403 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 RECKO95980 971 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 IGHEP01854 428 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 FAM157BP0CG42 384 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 UBBP0CG47 229 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 UBCP0CG48 685 aaKnown RBP9.75□□□□□ -0.85
FAM3A-221ENST00000612856 MTNR1BP49286 362 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 FXYD6P3P58550 94 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 SNRPNP63162 240 aaKnown RBP9.75□□□□□ -0.85
FAM3A-221ENST00000612856 MRPL49Q13405 166 aaKnown RBP9.75□□□□□ -0.85
FAM3A-221ENST00000612856 PGGHGQ32M88 737 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 ZNF766Q5HY98 468 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 SPATA46Q5T0L3 261 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 OVCH2Q7RTZ1 564 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 OR6V1Q8N148 313 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 ARL11Q969Q4 196 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 TESQ9UGI8 421 aaKnown RBP9.75□□□□□ -0.85
FAM3A-221ENST00000612856 SHPKQ9UHJ6 478 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 DHDHQ9UQ10 334 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 SLC5A6Q9Y289 635 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 PCDHGA5Q9Y5G8 931 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 GBF1Q92538 1859 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 TRAV18A0A075B6X5 111 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 A8MVM7 634 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 PYCARD-AS1I3L0S3 204 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 IL2RAP01589 272 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 CCL3P10147 92 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 SLC2A5P22732 501 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 CDAP32320 146 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 P2RX1P51575 399 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 ZP1P60852 638 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 FAM69AQ5T7M9 428 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 SLC18B1Q6NT16 456 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 MRPL21Q7Z2W9 205 aaKnown RBP9.75□□□□□ -0.85
FAM3A-221ENST00000612856 DEFB108BQ8NET1 73 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 FGF11Q92914 225 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 CLDN23Q96B33 292 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 RASL10BQ96S79 203 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 INTS14Q96SY0 518 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 FAM117AQ9C073 453 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 GSKIPQ9P0R6 139 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 OR14J1Q9UGF5 321 aa9.75□□□□□ -0.85
FAM3A-221ENST00000612856 ZNF346Q9UL40 294 aaKnown RBP9.75□□□□□ -0.85
FAM3A-221ENST00000612856 KCNAB3O43448 404 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 ABHD16AO95870 558 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 FGF9P31371 208 aaPredicted RBP9.74□□□□□ -0.85
FAM3A-221ENST00000612856 CD226Q15762 336 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 ACKR1Q16570 336 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 SLC22A6Q4U2R8 563 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 NCMAPQ5T1S8 102 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 OR13C3Q8NGS6 347 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 KTI12Q96EK9 354 aaPredicted RBP9.74□□□□□ -0.85
FAM3A-221ENST00000612856 ALG12Q9BV10 488 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 PTDSS2Q9BVG9 487 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 ZMAT3Q9HA38 289 aaKnown RBP9.74□□□□□ -0.85
FAM3A-221ENST00000612856 DYNLRB1Q9NP97 96 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 OBP2BQ9NPH6 170 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 ZFP57Q9NU63 452 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 TBX6O95947 436 aaPredicted RBP9.74□□□□□ -0.85
FAM3A-221ENST00000612856 ATF1P18846 271 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 CNR1P21554 472 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 EIF3IQ13347 325 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms