RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 PRRC2CQ9Y520 2896 aaKnown RBP7.81□□□□□ -1.16
CCDC47-207ENST00000612558 FABP12A6NFH5 140 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 IFITM5A6NNB3 132 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 H3BSH0 61 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 AIPO00170 330 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 P2RY10O00398 339 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 SYNGR3O43761 229 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 HPGDSO60760 199 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 SS18L1O75177 396 aaPredicted RBP7.8□□□□□ -1.16
CCDC47-207ENST00000612558 SLC2A2P11168 524 aaPredicted RBP7.8□□□□□ -1.16
CCDC47-207ENST00000612558 ZNF32P17041 273 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 ATF1P18846 271 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 AGTR1P30556 359 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 OTX1P32242 354 aaPredicted RBP7.8□□□□□ -1.16
CCDC47-207ENST00000612558 TMPRSS3P57727 454 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 ARF1P84077 181 aaKnown RBP7.8□□□□□ -1.16
CCDC47-207ENST00000612558 GALK2Q01415 458 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 SF3B4Q15427 424 aaKnown RBP eCLIP7.8□□□□□ -1.168e-19■■■■■ 28.8
CCDC47-207ENST00000612558 METAP1DQ6UB28 335 aaPredicted RBP7.8□□□□□ -1.16
CCDC47-207ENST00000612558 ZNF627Q7L945 461 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 LRRTM1Q86UE6 522 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 SKA3Q8IX90 412 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 UBE2J2Q8N2K1 259 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 ZNF433Q8N7K0 673 aaPredicted RBP7.8□□□□□ -1.16
CCDC47-207ENST00000612558 OR13C3Q8NGS6 347 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 TRIB1Q96RU8 372 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 GFI1Q99684 422 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 MRI1Q9BV20 369 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 CKLFQ9UBR5 152 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 FOXJ3Q9UPW0 622 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 MGAQ8IWI9 3026 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 ARHGAP21Q5T5U3 1957 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 TRAV8-7A0A075B6U6 113 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 A0A1B0GVI7 797 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 F5H5K5 113 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 SYT7O43581 403 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 DOK2O60496 412 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 UPK1BO75841 260 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 MAS1P04201 325 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 ANXA2P07355 339 aaKnown RBP7.8□□□□□ -1.16
CCDC47-207ENST00000612558 SLC2A1P11166 492 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 ADRA2CP18825 462 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 FSTP19883 344 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 PTBP1P26599 531 aaKnown RBP eCLIP7.8□□□□□ -1.16
CCDC47-207ENST00000612558 OR3A2P47893 321 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 EVX1P49640 407 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 TPTEP56180 551 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 PSG4Q00888 419 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 FAPQ12884 760 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 ZNF181Q2M3W8 571 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 RSPO1Q2MKA7 263 aaPredicted RBP7.8□□□□□ -1.16
CCDC47-207ENST00000612558 KRTCAP3Q53RY4 240 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 FBXW9Q5XUX1 488 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 ZNF774Q6NX45 483 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 XKRXQ6PP77 449 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 FAM131AQ6UXB0 335 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 FAM57BQ71RH2 274 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 PRSS45Q7RTY3 260 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 LRRC28Q86X40 367 aaPredicted RBP7.8□□□□□ -1.16
CCDC47-207ENST00000612558 OR8B12Q8NGG6 310 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 OR5M9Q8NGP3 310 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 OR1F12Q8NHA8 337 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 TRMT10AQ8TBZ6 339 aaKnown RBP7.8□□□□□ -1.16
CCDC47-207ENST00000612558 EXTL1Q92935 676 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 CCDC32Q9BV29 185 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 OR2H1Q9GZK4 316 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 ZNF275Q9NSD4 429 aaPredicted RBP7.8□□□□□ -1.16
CCDC47-207ENST00000612558 MALT1Q9UDY8 824 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 SPATA2Q9UM82 520 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 TP53TG5Q9Y2B4 290 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 V9GYH0 126 aa7.8□□□□□ -1.16
CCDC47-207ENST00000612558 FRYQ5TBA9 3013 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 A0A1B0GTI1 187 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 MEGF11A6BM72 1044 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 OR6C6A6NF89 314 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 ANXA2P2A6NMY6 339 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 FAM25AB3EWG3 89 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 FAM25CB3EWG5 89 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 FAM25GB3EWG6 89 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 M0R135 149 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 PAHP00439 452 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 MMP7P09237 267 aaPredicted RBP7.79□□□□□ -1.16
CCDC47-207ENST00000612558 PATE4P0C8F1 98 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 ZNF12P17014 697 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 IGFBP3P17936 291 aaPredicted RBP7.79□□□□□ -1.16
CCDC47-207ENST00000612558 CCL1P22362 96 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 CRYGSP22914 178 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 MPGP29372 298 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 SLC6A9P48067 706 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 KRTAP27-1Q3LI81 207 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 SLC36A2Q495M3 483 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 ASPHD2Q6ICH7 369 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 OR2A2Q6IF42 318 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 CNIH2Q6PI25 160 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 DRAM2Q6UX65 266 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 DOK3Q7L591 496 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 FAM214BQ7L5A3 538 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 FGD2Q7Z6J4 655 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 SERPINA12Q8IW75 414 aa7.79□□□□□ -1.16
CCDC47-207ENST00000612558 SAMD12Q8N8I0 201 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms