RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 TMEM100Q9NV29 134 aa15.36■□□□□ 0.05
VCX3A-203ENST00000612369 UBAP1Q9NZ09 502 aa15.36■□□□□ 0.05
VCX3A-203ENST00000612369 PCDHB10Q9UN67 800 aa15.36■□□□□ 0.05
VCX3A-203ENST00000612369 COMMD3-BMI1R4GMX3 469 aa15.36■□□□□ 0.05
VCX3A-203ENST00000612369 DHRS12A0PJE2 317 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 TVP23AA6NH52 213 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 RIIAD1A6NNX1 92 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 FOXH1O75593 365 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 SOX14O95416 240 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 SBK2P0C263 348 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 CPT2P23786 658 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 OTX1P32242 354 aaPredicted RBP15.35■□□□□ 0.05
VCX3A-203ENST00000612369 BTG1P62324 171 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 GK2Q14410 553 aaPredicted RBP15.35■□□□□ 0.05
VCX3A-203ENST00000612369 ZNF181Q2M3W8 571 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 DCAF12L2Q5VW00 463 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 DRAM2Q6UX65 266 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 PGAP1Q75T13 922 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 OR9Q1Q8NGQ5 310 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 OR4Q3Q8NH05 313 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 TEX47Q8TBZ9 253 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 BCAS4Q8TDM0 211 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 CANT1Q8WVQ1 401 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 ZNRF4Q8WWF5 429 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 MEGF10Q96KG7 1140 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 SIGLEC11Q96RL6 698 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 FEVQ99581 238 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 NIPSNAP1Q9BPW8 284 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 METTL17Q9H7H0 456 aaPredicted RBP15.35■□□□□ 0.05
VCX3A-203ENST00000612369 YY1AP1Q9H869 796 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 PATZ1Q9HBE1 687 aaKnown RBP15.35■□□□□ 0.05
VCX3A-203ENST00000612369 CMC2Q9NRP2 79 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 ARMC1Q9NVT9 282 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 DCAF16Q9NXF7 216 aa15.35■□□□□ 0.05
VCX3A-203ENST00000612369 TMEM178BH3BS89 294 aa15.34■□□□□ 0.05
VCX3A-203ENST00000612369 GNGT2O14610 69 aa15.34■□□□□ 0.05
VCX3A-203ENST00000612369 GYG2O15488 501 aa15.34■□□□□ 0.05
VCX3A-203ENST00000612369 ZNF3P17036 446 aa15.34■□□□□ 0.05
VCX3A-203ENST00000612369 SPI1P17947 270 aa15.34■□□□□ 0.05
VCX3A-203ENST00000612369 MDH2P40926 338 aaKnown RBP15.34■□□□□ 0.05
VCX3A-203ENST00000612369 ENTPD1P49961 510 aa15.34■□□□□ 0.05
VCX3A-203ENST00000612369 DCXRQ7Z4W1 244 aa15.34■□□□□ 0.05
VCX3A-203ENST00000612369 NAA40Q86UY6 237 aa15.34■□□□□ 0.05
VCX3A-203ENST00000612369 MUC20Q8N307 709 aaPredicted RBP15.34■□□□□ 0.05
VCX3A-203ENST00000612369 CELF2-AS1Q8N7Q2 184 aa15.34■□□□□ 0.05
VCX3A-203ENST00000612369 BHLHE23Q8NDY6 225 aa15.34■□□□□ 0.05
VCX3A-203ENST00000612369 OR10AD1Q8NGE0 317 aa15.34■□□□□ 0.05
VCX3A-203ENST00000612369 OR51L1Q8NGJ5 315 aa15.34■□□□□ 0.05
VCX3A-203ENST00000612369 OR10S1Q8NGN2 331 aa15.34■□□□□ 0.05
VCX3A-203ENST00000612369 SLCO4A1Q96BD0 722 aa15.34■□□□□ 0.05
VCX3A-203ENST00000612369 TMPRSS13Q9BYE2 586 aa15.34■□□□□ 0.05
VCX3A-203ENST00000612369 SLC22A4Q9H015 551 aa15.34■□□□□ 0.05
VCX3A-203ENST00000612369 WDR76Q9H967 626 aa15.34■□□□□ 0.05
VCX3A-203ENST00000612369 NOP16Q9Y3C1 178 aaKnown RBP15.34■□□□□ 0.05
VCX3A-203ENST00000612369 ZNF593O00488 134 aaPredicted RBP15.33■□□□□ 0.04
VCX3A-203ENST00000612369 MLNRO43193 412 aa15.33■□□□□ 0.04
VCX3A-203ENST00000612369 FSTL3O95633 263 aa15.33■□□□□ 0.04
VCX3A-203ENST00000612369 GRK5P34947 590 aa15.33■□□□□ 0.04
VCX3A-203ENST00000612369 RPS27P42677 84 aaKnown RBP15.33■□□□□ 0.04
VCX3A-203ENST00000612369 MMP16P51512 607 aa15.33■□□□□ 0.04
VCX3A-203ENST00000612369 ZMYND11Q15326 602 aa15.33■□□□□ 0.04
VCX3A-203ENST00000612369 C1orf229Q6ZS94 237 aaPredicted RBP15.33■□□□□ 0.04
VCX3A-203ENST00000612369 MRPL21Q7Z2W9 205 aaKnown RBP15.33■□□□□ 0.04
VCX3A-203ENST00000612369 SPRYD4Q8WW59 207 aaPredicted RBP15.33■□□□□ 0.04
VCX3A-203ENST00000612369 ERGIC1Q969X5 290 aa15.33■□□□□ 0.04
VCX3A-203ENST00000612369 KCNJ15Q99712 375 aa15.33■□□□□ 0.04
VCX3A-203ENST00000612369 C19orf24Q9BVV8 132 aa15.33■□□□□ 0.04
VCX3A-203ENST00000612369 POLR3KQ9Y2Y1 108 aaPredicted RBP15.33■□□□□ 0.04
VCX3A-203ENST00000612369 WNK2Q9Y3S1 2297 aa15.32■□□□□ 0.04
VCX3A-203ENST00000612369 LRRC30A6NM36 301 aa15.32■□□□□ 0.04
VCX3A-203ENST00000612369 H0YL77 283 aa15.32■□□□□ 0.04
VCX3A-203ENST00000612369 H3BN98 237 aa15.32■□□□□ 0.04
VCX3A-203ENST00000612369 GYPBP06028 91 aa15.32■□□□□ 0.04
VCX3A-203ENST00000612369 SPARCP09486 303 aa15.32■□□□□ 0.04
VCX3A-203ENST00000612369 GATA4P43694 442 aa15.32■□□□□ 0.04
VCX3A-203ENST00000612369 SLC15A1P46059 708 aa15.32■□□□□ 0.04
VCX3A-203ENST00000612369 SLC6A9P48067 706 aa15.32■□□□□ 0.04
VCX3A-203ENST00000612369 FLOT2Q14254 428 aa15.32■□□□□ 0.04
VCX3A-203ENST00000612369 TAF13Q15543 124 aa15.32■□□□□ 0.04
VCX3A-203ENST00000612369 LYPD4Q6UWN0 246 aa15.32■□□□□ 0.04
VCX3A-203ENST00000612369 C1QL2Q7Z5L3 287 aa15.32■□□□□ 0.04
VCX3A-203ENST00000612369 C1orf87Q8N0U7 546 aa15.32■□□□□ 0.04
VCX3A-203ENST00000612369 ZNF511Q8NB15 262 aa15.32■□□□□ 0.04
VCX3A-203ENST00000612369 OR6K6Q8NGW6 343 aa15.32■□□□□ 0.04
VCX3A-203ENST00000612369 SLAMF6Q96DU3 332 aa15.32■□□□□ 0.04
VCX3A-203ENST00000612369 COPS4Q9BT78 406 aa15.32■□□□□ 0.04
VCX3A-203ENST00000612369 OCEL1Q9H607 264 aa15.32■□□□□ 0.04
VCX3A-203ENST00000612369 OPA3Q9H6K4 179 aa15.32■□□□□ 0.04
VCX3A-203ENST00000612369 A8MXK9 166 aa15.31■□□□□ 0.04
VCX3A-203ENST00000612369 ZNF878C9JN71 531 aa15.31■□□□□ 0.04
VCX3A-203ENST00000612369 F5H0A9 414 aaPredicted RBP15.31■□□□□ 0.04
VCX3A-203ENST00000612369 F5H5P2 479 aa15.31■□□□□ 0.04
VCX3A-203ENST00000612369 AVPP01185 164 aa15.31■□□□□ 0.04
VCX3A-203ENST00000612369 CD200P41217 278 aa15.31■□□□□ 0.04
VCX3A-203ENST00000612369 RAD23AP54725 363 aa15.31■□□□□ 0.04
VCX3A-203ENST00000612369 LCN2P80188 198 aa15.31■□□□□ 0.04
VCX3A-203ENST00000612369 LINC01590Q5TEZ4 76 aa15.31■□□□□ 0.04
VCX3A-203ENST00000612369 RHOUQ7L0Q8 258 aa15.31■□□□□ 0.04
VCX3A-203ENST00000612369 SPATA24Q86W54 205 aa15.31■□□□□ 0.04
VCX3A-203ENST00000612369 ZNF420Q8TAQ5 688 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms