RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 GPR137CQ8N3F9 429 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 C1orf162Q8NEQ5 155 aaPredicted RBP7.73□□□□□ -1.17
SMAD4-217ENST00000611848 SNX33Q8WV41 574 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 S100PBPQ96BU1 408 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 ALKBH3Q96Q83 286 aaPredicted RBP7.73□□□□□ -1.17
SMAD4-217ENST00000611848 TSPAN32Q96QS1 320 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 OR2M2Q96R28 347 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 ALG12Q9BV10 488 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 EMC6Q9BV81 110 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 B3GAT2Q9NPZ5 323 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 GRHPRQ9UBQ7 328 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 COPS3Q9UNS2 423 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 NAV2Q8IVL1 2488 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 ANKRD61A6NGH8 418 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 OR5H1A6NKK0 313 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 GPRIN2O60269 458 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 ICMTO60725 284 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 GATBO75879 557 aaKnown RBP7.72□□□□□ -1.17
SMAD4-217ENST00000611848 F13BP05160 661 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 UCHL1P09936 223 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 MYL9P24844 172 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 APEX1P27695 318 aaKnown RBP7.72□□□□□ -1.17
SMAD4-217ENST00000611848 CSNK1A1P48729 337 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 GDI2P50395 445 aaKnown RBP7.72□□□□□ -1.17
SMAD4-217ENST00000611848 DAP3P51398 398 aaKnown RBP7.72□□□□□ -1.17
SMAD4-217ENST00000611848 CAMK2DQ13557 499 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 TSC22D1Q15714 1073 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 TAB1Q15750 504 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 GABRA6Q16445 453 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 MESTQ5EB52 335 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 FAM27D1Q5T7N8 215 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 SFXN4Q6P4A7 337 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 SPATC1Q76KD6 591 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 KCTD20Q7Z5Y7 419 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 TIGD4Q8IY51 512 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 C17orf78Q8N4C9 275 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 CELF2-AS1Q8N7Q2 184 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 OR6K6Q8NGW6 343 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 PHYHIPQ92561 330 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 HPS1Q92902 700 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 MUCL1Q96DR8 90 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 SLC25A44Q96H78 314 aaPredicted RBP7.72□□□□□ -1.17
SMAD4-217ENST00000611848 ZC3HAV1LQ96H79 300 aaKnown RBP7.72□□□□□ -1.17
SMAD4-217ENST00000611848 BOD1Q96IK1 185 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 SNX18Q96RF0 628 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 MNTQ99583 582 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 SLC22A4Q9H015 551 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 TXNIPQ9H3M7 391 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 NGBQ9NPG2 151 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 RPRD1BQ9NQG5 326 aaKnown RBP7.72□□□□□ -1.17
SMAD4-217ENST00000611848 CYSLTR2Q9NS75 346 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 ACOXLQ9NUZ1 547 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 NPAP1Q9NZP6 1156 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 ZNF346Q9UL40 294 aaKnown RBP7.72□□□□□ -1.17
SMAD4-217ENST00000611848 PLCE1Q9P212 2302 aa7.72□□□□□ -1.17
SMAD4-217ENST00000611848 MAGEB4O15481 346 aaPredicted RBP7.71□□□□□ -1.17
SMAD4-217ENST00000611848 PLA2G10O15496 165 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 CTAG2O75638 210 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 RAD51DO75771 328 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 ARL6IP5O75915 188 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 IGHG1P01857 330 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 IGHMP01871 453 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 THBDP07204 575 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 PRF1P14222 555 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 ELK1P19419 428 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 HOXC12P31275 282 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 FOXG1P55316 489 aaPredicted RBP7.71□□□□□ -1.17
SMAD4-217ENST00000611848 MRPL28Q13084 256 aaKnown RBP7.71□□□□□ -1.17
SMAD4-217ENST00000611848 P2RY14Q15391 338 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 STK11Q15831 433 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 ACKR1Q16570 336 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 BEX5Q5H9J7 111 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 CEP78Q5JTW2 689 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 IDNKQ5T6J7 187 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 C9orf135Q5VTT2 229 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 AGAP6Q5VW22 663 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 CARD17Q5XLA6 110 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 FAM205BPQ63HN1 556 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 LYPD4Q6UWN0 246 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 C22orf34Q6ZV56 151 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 LRRC28Q86X40 367 aaPredicted RBP7.71□□□□□ -1.17
SMAD4-217ENST00000611848 RDH10Q8IZV5 341 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 Q8N402 240 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 OR6N1Q8NGY5 312 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 OR2T4Q8NH00 348 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 HAVCR2Q8TDQ0 301 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 ASB10Q8WXI3 467 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 NEDD4LQ96PU5 975 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 C11orf54Q9H0W9 315 aaPredicted RBP7.71□□□□□ -1.17
SMAD4-217ENST00000611848 MARCH7Q9H992 704 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 CRLF2Q9HC73 371 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 GPR35Q9HC97 309 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 GLTPQ9NZD2 209 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 GNG8Q9UK08 70 aa7.71□□□□□ -1.17
SMAD4-217ENST00000611848 DCHS2Q6V1P9 2916 aa7.71□□□□□ -1.18
SMAD4-217ENST00000611848 TRBV2A0A0J9YWF9 115 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 PRR32B1ATL7 298 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 DCTN6O00399 190 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 RENP00797 406 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 SLC2A2P11168 524 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms