RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 ATP6AP1Q15904 470 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 KLHL12Q53G59 568 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 TEX30Q5JUR7 227 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 AVPI1Q5T686 147 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 ACSM5Q6NUN0 579 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 PLBD1Q6P4A8 553 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 DRAM2Q6UX65 266 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 PGAP1Q75T13 922 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 SHFQ7M4L6 423 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 ZDHHC13Q8IUH4 622 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 BHLHE23Q8NDY6 225 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 OR8G5Q8NG78 346 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 OR13G1Q8NGZ3 307 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 ZNRF4Q8WWF5 429 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 RAB39BQ96DA2 213 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 PNRC2Q9NPJ4 139 aaKnown RBP11.37□□□□□ -0.59
SENP3-209ENST00000610454 KRT84Q9NSB2 600 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 TREM2Q9NZC2 230 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 IL19Q9UHD0 177 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 ABCA2Q9BZC7 2435 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 APOC1P02654 83 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 ANPEPP15144 967 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 IGFBP5P24593 272 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 SRP9P49458 86 aaKnown RBP11.36□□□□□ -0.59
SENP3-209ENST00000610454 PRKXP51817 358 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 RAD23AP54725 363 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 CDK5Q00535 292 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 SNAPC1Q16533 368 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 KRTAP27-1Q3LI81 207 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 COLCA1Q6ZS62 124 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 SPATC1Q76KD6 591 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 GLCCI1Q86VQ1 547 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 ZNF283Q8N7M2 679 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 SPRYD4Q8WW59 207 aaPredicted RBP11.36□□□□□ -0.59
SENP3-209ENST00000610454 ITLN1Q8WWA0 313 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 UTP4Q969X6 686 aaKnown RBP11.36□□□□□ -0.59
SENP3-209ENST00000610454 KCNJ15Q99712 375 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 GAL3ST1Q99999 423 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 SOX7Q9BT81 388 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 SP140LQ9H930 580 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 NTN4Q9HB63 628 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 SLC25A19Q9HC21 320 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 TMEM100Q9NV29 134 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 ENOPH1Q9UHY7 261 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 PPP1R3CQ9UQK1 317 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 NOP16Q9Y3C1 178 aaKnown RBP11.36□□□□□ -0.59
SENP3-209ENST00000610454 WIPI2Q9Y4P8 454 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 N6AMT1Q9Y5N5 214 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 CACNG2Q9Y698 323 aa11.36□□□□□ -0.59
SENP3-209ENST00000610454 IQCF6A8MYZ5 107 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 PRODHO43272 600 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 FAM157CP0CG43 387 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 CRISP1P54107 249 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 ESRRGP62508 458 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 GK2Q14410 553 aaPredicted RBP11.35□□□□□ -0.59
SENP3-209ENST00000610454 PCK2Q16822 640 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 RSPO1Q2MKA7 263 aaPredicted RBP11.35□□□□□ -0.59
SENP3-209ENST00000610454 LINC01590Q5TEZ4 76 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 TMEM236Q5W0B7 351 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 FAHD1Q6P587 224 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 Q6ZR03 302 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 DPY19L4Q7Z388 723 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 NAA40Q86UY6 237 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.35□□□□□ -0.59
SENP3-209ENST00000610454 CPOQ8IVL8 374 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 PARP8Q8N3A8 854 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 OR10AD1Q8NGE0 317 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 OR10S1Q8NGN2 331 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 OR51F2Q8NH61 342 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 ZMYND19Q96E35 227 aaPredicted RBP11.35□□□□□ -0.59
SENP3-209ENST00000610454 OR2V2Q96R30 315 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 TOR3AQ9H497 397 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 OPA3Q9H6K4 179 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 ZNF665Q9H7R5 613 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 LPAR2Q9HBW0 351 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 TVP23BQ9NYZ1 205 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 DYSFO75923 2080 aa11.35□□□□□ -0.59
SENP3-209ENST00000610454 GGT3PA6NGU5 568 aa11.34□□□□□ -0.59
SENP3-209ENST00000610454 IFNL4K9M1U5 179 aa11.34□□□□□ -0.59
SENP3-209ENST00000610454 WNT9BO14905 357 aa11.34□□□□□ -0.59
SENP3-209ENST00000610454 TBX1O43435 398 aa11.34□□□□□ -0.59
SENP3-209ENST00000610454 ANXA2P07355 339 aaKnown RBP11.34□□□□□ -0.59
SENP3-209ENST00000610454 MSMBP08118 114 aa11.34□□□□□ -0.59
SENP3-209ENST00000610454 H2BFMP0C1H6 154 aa11.34□□□□□ -0.59
SENP3-209ENST00000610454 SRD5A1P18405 259 aa11.34□□□□□ -0.59
SENP3-209ENST00000610454 CX3CR1P49238 355 aa11.34□□□□□ -0.59
SENP3-209ENST00000610454 DAPP51397 102 aa11.34□□□□□ -0.59
SENP3-209ENST00000610454 DVL1P1P54792 670 aaPredicted RBP11.34□□□□□ -0.59
SENP3-209ENST00000610454 CR1LQ2VPA4 569 aa11.34□□□□□ -0.59
SENP3-209ENST00000610454 SLC35D3Q5M8T2 416 aa11.34□□□□□ -0.59
SENP3-209ENST00000610454 FAM120AOSQ5T036 256 aa11.34□□□□□ -0.59
SENP3-209ENST00000610454 CXXC5Q7LFL8 322 aaKnown RBP11.34□□□□□ -0.59
SENP3-209ENST00000610454 AMIGO2Q86SJ2 522 aa11.34□□□□□ -0.59
SENP3-209ENST00000610454 ST7LQ8TDW4 575 aa11.34□□□□□ -0.59
SENP3-209ENST00000610454 THEM6Q8WUY1 208 aa11.34□□□□□ -0.59
SENP3-209ENST00000610454 SLC30A2Q9BRI3 323 aa11.34□□□□□ -0.59
SENP3-209ENST00000610454 TMEM106BQ9NUM4 274 aa11.34□□□□□ -0.59
SENP3-209ENST00000610454 UBAP1Q9NZ09 502 aa11.34□□□□□ -0.59
SENP3-209ENST00000610454 TMEFF2Q9UIK5 374 aaPredicted RBP11.34□□□□□ -0.59
SENP3-209ENST00000610454 PCDHB10Q9UN67 800 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms