RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 CYSLTR2Q9NS75 346 aa16.28■□□□□ 0.2
SGMS1-208ENST00000608287 DECR2Q9NUI1 292 aa16.28■□□□□ 0.2
SGMS1-208ENST00000608287 NKIRAS2Q9NYR9 191 aa16.28■□□□□ 0.2
SGMS1-208ENST00000608287 KCNG2Q9UJ96 466 aa16.28■□□□□ 0.2
SGMS1-208ENST00000608287 DEAF1O75398 565 aaPredicted RBP16.27■□□□□ 0.2
SGMS1-208ENST00000608287 SPI1P17947 270 aa16.27■□□□□ 0.2
SGMS1-208ENST00000608287 TUBG1P23258 451 aa16.27■□□□□ 0.2
SGMS1-208ENST00000608287 FMO3P31513 532 aa16.27■□□□□ 0.2
SGMS1-208ENST00000608287 LIPAP38571 399 aa16.27■□□□□ 0.2
SGMS1-208ENST00000608287 RPS27P42677 84 aaKnown RBP16.27■□□□□ 0.2
SGMS1-208ENST00000608287 RGS6P49758 472 aa16.27■□□□□ 0.2
SGMS1-208ENST00000608287 SLC25A1P53007 311 aa16.27■□□□□ 0.2
SGMS1-208ENST00000608287 PSG7Q13046 419 aa16.27■□□□□ 0.2
SGMS1-208ENST00000608287 SLC27A4Q6P1M0 643 aa16.27■□□□□ 0.2
SGMS1-208ENST00000608287 LYPD4Q6UWN0 246 aa16.27■□□□□ 0.2
SGMS1-208ENST00000608287 OR6K6Q8NGW6 343 aa16.27■□□□□ 0.2
SGMS1-208ENST00000608287 YIPF5Q969M3 257 aa16.27■□□□□ 0.2
SGMS1-208ENST00000608287 OTULINQ96BN8 352 aa16.27■□□□□ 0.2
SGMS1-208ENST00000608287 NMNAT2Q9BZQ4 307 aa16.27■□□□□ 0.2
SGMS1-208ENST00000608287 G6PC2Q9NQR9 355 aa16.27■□□□□ 0.2
SGMS1-208ENST00000608287 TUBG2Q9NRH3 451 aa16.27■□□□□ 0.2
SGMS1-208ENST00000608287 TREM2Q9NZC2 230 aa16.27■□□□□ 0.2
SGMS1-208ENST00000608287 KIF17Q9P2E2 1029 aa16.27■□□□□ 0.2
SGMS1-208ENST00000608287 ZSCAN5BA6NJL1 495 aa16.26■□□□□ 0.19
SGMS1-208ENST00000608287 CDC14BO60729 498 aa16.26■□□□□ 0.19
SGMS1-208ENST00000608287 IGHV1-46P01743 117 aa16.26■□□□□ 0.19
SGMS1-208ENST00000608287 CLUP10909 449 aa16.26■□□□□ 0.19
SGMS1-208ENST00000608287 OSMP13725 252 aa16.26■□□□□ 0.19
SGMS1-208ENST00000608287 ECH1Q13011 328 aa16.26■□□□□ 0.19
SGMS1-208ENST00000608287 GINS1Q14691 196 aa16.26■□□□□ 0.19
SGMS1-208ENST00000608287 OR5L1Q8NGL2 311 aa16.26■□□□□ 0.19
SGMS1-208ENST00000608287 CMBLQ96DG6 245 aa16.26■□□□□ 0.19
SGMS1-208ENST00000608287 ATF6BQ99941 703 aa16.26■□□□□ 0.19
SGMS1-208ENST00000608287 MED20Q9H944 212 aa16.26■□□□□ 0.19
SGMS1-208ENST00000608287 WDR76Q9H967 626 aa16.26■□□□□ 0.19
SGMS1-208ENST00000608287 SAP30LQ9HAJ7 183 aa16.26■□□□□ 0.19
SGMS1-208ENST00000608287 MSL2Q9HCI7 577 aa16.26■□□□□ 0.19
SGMS1-208ENST00000608287 ESM1Q9NQ30 184 aa16.26■□□□□ 0.19
SGMS1-208ENST00000608287 ZNF275Q9NSD4 429 aaPredicted RBP16.26■□□□□ 0.19
SGMS1-208ENST00000608287 PTTG3PQ9NZH4 202 aa16.26■□□□□ 0.19
SGMS1-208ENST00000608287 CGGBP1Q9UFW8 167 aaPredicted RBP16.26■□□□□ 0.19
SGMS1-208ENST00000608287 PURGQ9UJV8 347 aaKnown RBP16.26■□□□□ 0.19
SGMS1-208ENST00000608287 COMMD3-BMI1R4GMX3 469 aa16.26■□□□□ 0.19
SGMS1-208ENST00000608287 FAM183AA6NL82 134 aa16.25■□□□□ 0.19
SGMS1-208ENST00000608287 F5H5K5 113 aa16.25■□□□□ 0.19
SGMS1-208ENST00000608287 J3QW42 95 aa16.25■□□□□ 0.19
SGMS1-208ENST00000608287 PPIHO43447 177 aaKnown RBP16.25■□□□□ 0.19
SGMS1-208ENST00000608287 CIB2O75838 187 aa16.25■□□□□ 0.19
SGMS1-208ENST00000608287 SPARCP09486 303 aa16.25■□□□□ 0.19
SGMS1-208ENST00000608287 ZMAT1Q5H9K5 638 aa16.25■□□□□ 0.19
SGMS1-208ENST00000608287 FAM209AQ5JX71 171 aa16.25■□□□□ 0.19
SGMS1-208ENST00000608287 DCAF12L2Q5VW00 463 aa16.25■□□□□ 0.19
SGMS1-208ENST00000608287 ZNF511Q8NB15 262 aa16.25■□□□□ 0.19
SGMS1-208ENST00000608287 PTP4A1Q93096 173 aa16.25■□□□□ 0.19
SGMS1-208ENST00000608287 UTP4Q969X6 686 aaKnown RBP16.25■□□□□ 0.19
SGMS1-208ENST00000608287 APOBEC3DQ96AK3 386 aaPredicted RBP16.25■□□□□ 0.19
SGMS1-208ENST00000608287 NRBF2Q96F24 287 aa16.25■□□□□ 0.19
SGMS1-208ENST00000608287 MAP6Q96JE9 813 aa16.25■□□□□ 0.19
SGMS1-208ENST00000608287 PNRC2Q9NPJ4 139 aaKnown RBP16.25■□□□□ 0.19
SGMS1-208ENST00000608287 ZDHHC8Q9ULC8 765 aa16.25■□□□□ 0.19
SGMS1-208ENST00000608287 PPIAL4AQ9Y536 164 aa16.25■□□□□ 0.19
SGMS1-208ENST00000608287 WNK2Q9Y3S1 2297 aa16.25■□□□□ 0.19
SGMS1-208ENST00000608287 IGHV1-69-2A0A0G2JMI3 117 aa16.24■□□□□ 0.19
SGMS1-208ENST00000608287 RP2O75695 350 aa16.24■□□□□ 0.19
SGMS1-208ENST00000608287 KITLGP21583 273 aa16.24■□□□□ 0.19
SGMS1-208ENST00000608287 PAICSP22234 425 aaKnown RBP16.24■□□□□ 0.19
SGMS1-208ENST00000608287 PRTN3P24158 256 aa16.24■□□□□ 0.19
SGMS1-208ENST00000608287 ENTPD1P49961 510 aa16.24■□□□□ 0.19
SGMS1-208ENST00000608287 HLXQ14774 488 aaPredicted RBP16.24■□□□□ 0.19
SGMS1-208ENST00000608287 RSPO1Q2MKA7 263 aaPredicted RBP16.24■□□□□ 0.19
SGMS1-208ENST00000608287 C1orf229Q6ZS94 237 aaPredicted RBP16.24■□□□□ 0.19
SGMS1-208ENST00000608287 USP51Q70EK9 711 aa16.24■□□□□ 0.19
SGMS1-208ENST00000608287 HAVCR1Q96D42 359 aa16.24■□□□□ 0.19
SGMS1-208ENST00000608287 DIRC2Q96SL1 478 aa16.24■□□□□ 0.19
SGMS1-208ENST00000608287 HCAR1Q9BXC0 346 aa16.24■□□□□ 0.19
SGMS1-208ENST00000608287 EGLN1Q9GZT9 426 aa16.24■□□□□ 0.19
SGMS1-208ENST00000608287 AP4S1Q9Y587 144 aa16.24■□□□□ 0.19
SGMS1-208ENST00000608287 NOTCH1P46531 2555 aa16.24■□□□□ 0.19
SGMS1-208ENST00000608287 ZNF593O00488 134 aaPredicted RBP16.23■□□□□ 0.19
SGMS1-208ENST00000608287 HMGN1P05114 100 aa16.23■□□□□ 0.19
SGMS1-208ENST00000608287 ACSM4P0C7M7 580 aa16.23■□□□□ 0.19
SGMS1-208ENST00000608287 PSKH1P11801 424 aa16.23■□□□□ 0.19
SGMS1-208ENST00000608287 RAC2P15153 192 aa16.23■□□□□ 0.19
SGMS1-208ENST00000608287 ADRA2CP18825 462 aa16.23■□□□□ 0.19
SGMS1-208ENST00000608287 CRYBB2P43320 205 aa16.23■□□□□ 0.19
SGMS1-208ENST00000608287 BLVRAP53004 296 aa16.23■□□□□ 0.19
SGMS1-208ENST00000608287 TPTEP56180 551 aa16.23■□□□□ 0.19
SGMS1-208ENST00000608287 LMO4P61968 165 aa16.23■□□□□ 0.19
SGMS1-208ENST00000608287 CDK5Q00535 292 aa16.23■□□□□ 0.19
SGMS1-208ENST00000608287 ATP6AP1Q15904 470 aa16.23■□□□□ 0.19
SGMS1-208ENST00000608287 KRTAP27-1Q3LI81 207 aa16.23■□□□□ 0.19
SGMS1-208ENST00000608287 HIST2H2BDQ6DRA6 164 aa16.23■□□□□ 0.19
SGMS1-208ENST00000608287 CCDC121Q6ZUS5 278 aa16.23■□□□□ 0.19
SGMS1-208ENST00000608287 DCXRQ7Z4W1 244 aa16.23■□□□□ 0.19
SGMS1-208ENST00000608287 OR5AS1Q8N127 324 aa16.23■□□□□ 0.19
SGMS1-208ENST00000608287 OR5K1Q8NHB7 308 aa16.23■□□□□ 0.19
SGMS1-208ENST00000608287 SPTSSAQ969W0 71 aa16.23■□□□□ 0.19
SGMS1-208ENST00000608287 TMPRSS13Q9BYE2 586 aa16.23■□□□□ 0.19
SGMS1-208ENST00000608287 OR51V1Q9H2C8 321 aa16.23■□□□□ 0.19
SGMS1-208ENST00000608287 ZNF665Q9H7R5 613 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms