RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 APOBEC3AP31941 199 aaPredicted RBP4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 LHX2P50458 406 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 AP3S2P59780 193 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 FXNQ16595 210 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 C1QTNF12Q5T7M4 302 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 PGBD2Q6P3X8 592 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 APOOLQ6UXV4 268 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 CEACAM19Q7Z692 300 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 SPICQ8N5J4 248 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 SAMD12Q8N8I0 201 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 SCCPDHQ8NBX0 429 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 C1orf162Q8NEQ5 155 aaPredicted RBP4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 OR5AK2Q8NH90 309 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 GRPEL2Q8TAA5 225 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 GPR148Q8TDV2 347 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 SLAMF6Q96DU3 332 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 ZNF385AQ96PM9 386 aaKnown RBP4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 DIRC2Q96SL1 478 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 ZNF442Q9H7R0 627 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 MYOZ1Q9NP98 299 aaPredicted RBP4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 ZFYVE26Q68DK2 2539 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 CEP192Q8TEP8 1941 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 TRIM64CA6NLI5 447 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 ZAR1LA6NP61 321 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 A8MV72 311 aaPredicted RBP4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 RBMXL2O75526 392 aaKnown RBP4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 HTR3BO95264 441 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 TBX6O95947 436 aaPredicted RBP4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 IL1AP01583 271 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 SCG5P05408 212 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 CLUP10909 449 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 FAUP35544 74 aaKnown RBP4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 CX3CR1P49238 355 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 CLDN18P56856 261 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 SNRPGP62308 76 aaKnown RBP4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 SORDQ00796 357 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 MEP1BQ16820 701 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 PCGF3Q3KNV8 242 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 OR2G6Q5TZ20 316 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 STEAP3Q658P3 488 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 DRAM2Q6UX65 266 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 ZNF620Q6ZNG0 422 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 GDPD3Q7L5L3 318 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 MDP1Q86V88 176 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 C10orf111Q8N326 155 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 TOMM5Q8N4H5 51 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 SMAP2Q8WU79 429 aaPredicted RBP4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 YIPF6Q96EC8 236 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 TXNDC15Q96J42 360 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 TECTBQ96PL2 329 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 CST11Q9H112 138 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 DLL4Q9NR61 685 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 ENAMQ9NRM1 1142 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 CGGBP1Q9UFW8 167 aaPredicted RBP4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 OR5V1Q9UGF6 321 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 B9D1Q9UPM9 204 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 A8MXE2 369 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 INMT-MINDY4F8WBC2 141 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 SMAD9O15198 467 aaKnown RBP4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 NDUFB3O43676 98 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 PRKYO43930 277 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 WBP4O75554 376 aaKnown RBP4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 IFNA6P05013 189 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 OR2T7P0C7T2 308 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 HIST1H1CP16403 213 aaKnown RBP4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 RAB3AP20336 220 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 TUBG1P23258 451 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 FPR2P25090 351 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 CDAP32320 146 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 TRAM1Q15629 374 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 HYAL4Q2M3T9 481 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 BCDIN3DQ7Z5W3 292 aaKnown RBP4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 MS4A15Q8N5U1 240 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 TMEM185AQ8NFB2 350 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 SEMA6DQ8NFY4 1073 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 OR2T27Q8NH04 317 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 RNF128Q8TEB7 428 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 ACOT12Q8WYK0 555 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 PTP4A1Q93096 173 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 MRI1Q9BV20 369 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 CDCA4Q9BXL8 241 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 DNTTIP1Q9H147 329 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 RGCCQ9H4X1 137 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 CHODLQ9H9P2 273 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 TMEM138Q9NPI0 162 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 TUBG2Q9NRH3 451 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 INPP5EQ9NRR6 644 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 CLEC2DQ9UHP7 191 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 GDF2Q9UK05 429 aaPredicted RBP4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 MPDZO75970 2070 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 DOPEY2Q9Y3R5 2298 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 IGLV3-32A0A0A0MS00 114 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 A0A0G2JNJ9 132 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 MBD3L4A6NDZ8 208 aaPredicted RBP4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 MBD3L3A6NE82 208 aaPredicted RBP4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 MBD3L5A6NJ08 208 aaPredicted RBP4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 TOR1AO14656 332 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 ARPC3O15145 178 aa4.55□□□□□ -1.68
SCARNA15-201ENST00000607520 GOSR1O95249 250 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms