RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 IFNA2P01563 188 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 IGHV2-70P01814 119 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 ZNF3P17036 446 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 HNF1AP20823 631 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 TUBG1P23258 451 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 FMO3P31513 532 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 GRK5P34947 590 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 SLC6A9P48067 706 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 ENTPD1P49961 510 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 MMP16P51512 607 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 SLC25A1P53007 311 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 HOXA4Q00056 320 aaPredicted RBP10.37□□□□□ -0.75
CTSA-210ENST00000606000 TMEM236Q5W0B7 351 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 PHC2Q8IXK0 858 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 OR8G5Q8NG78 346 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 OR5L1Q8NGL2 311 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 OR51F2Q8NH61 342 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 ST7LQ8TDW4 575 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 RAB1CQ92928 201 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 DVL3Q92997 716 aaPredicted RBP10.37□□□□□ -0.75
CTSA-210ENST00000606000 SLAMF6Q96DU3 332 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 ZNF799Q96GE5 643 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 TIMD4Q96H15 378 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 MEGF10Q96KG7 1140 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 AMELYQ99218 206 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 NTN4Q9HB63 628 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 TUBG2Q9NRH3 451 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 CENPMQ9NSP4 180 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 DDX28Q9NUL7 540 aaKnown RBP10.37□□□□□ -0.75
CTSA-210ENST00000606000 NPTNQ9Y639 398 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 SVEP1Q4LDE5 3571 aa10.37□□□□□ -0.75
CTSA-210ENST00000606000 RNF212BA8MTL3 300 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 PLPP2O43688 288 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 ZNF205O95201 554 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 CYB5R3P00387 301 aaPredicted RBP10.36□□□□□ -0.75
CTSA-210ENST00000606000 AVPP01185 164 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 IFNGP01579 166 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 SBK2P0C263 348 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 TNFSF4P23510 183 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 OTX1P32242 354 aaPredicted RBP10.36□□□□□ -0.75
CTSA-210ENST00000606000 PRKXP51817 358 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 SEC61A1P61619 476 aaKnown RBP10.36□□□□□ -0.75
CTSA-210ENST00000606000 ECH1Q13011 328 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 GK3PQ14409 553 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 GINS1Q14691 196 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 ZMYND11Q15326 602 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 PCK2Q16822 640 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 KRTAP24-1Q3LI83 254 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 GLYATL3Q5SZD4 288 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 PLBD1Q6P4A8 553 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 C1orf229Q6ZS94 237 aaPredicted RBP10.36□□□□□ -0.75
CTSA-210ENST00000606000 ERI1Q8IV48 349 aaKnown RBP10.36□□□□□ -0.75
CTSA-210ENST00000606000 PAPD5Q8NDF8 572 aaKnown RBP10.36□□□□□ -0.75
CTSA-210ENST00000606000 BBS1Q8NFJ9 593 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 OR6N2Q8NGY6 317 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 POP5Q969H6 163 aaKnown RBP10.36□□□□□ -0.75
CTSA-210ENST00000606000 ZMYND19Q96E35 227 aaPredicted RBP10.36□□□□□ -0.75
CTSA-210ENST00000606000 ZNF582Q96NG8 517 aaPredicted RBP10.36□□□□□ -0.75
CTSA-210ENST00000606000 SLC30A2Q9BRI3 323 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 COPS4Q9BT78 406 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 OR51V1Q9H2C8 321 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 GCM1Q9NP62 436 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 G6PC2Q9NQR9 355 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 DNAJB9Q9UBS3 223 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 IL19Q9UHD0 177 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 PPP1R3CQ9UQK1 317 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 N6AMT1Q9Y5N5 214 aa10.36□□□□□ -0.75
CTSA-210ENST00000606000 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.36□□□□□ -0.754e-7■□□□□ 9.7
CTSA-210ENST00000606000 SURF4O15260 269 aa10.35□□□□□ -0.75
CTSA-210ENST00000606000 SELENOFO60613 162 aa10.35□□□□□ -0.75
CTSA-210ENST00000606000 OSMP13725 252 aa10.35□□□□□ -0.75
CTSA-210ENST00000606000 TNFRSF1AP19438 455 aa10.35□□□□□ -0.75
CTSA-210ENST00000606000 SRP14P37108 136 aaKnown RBP10.35□□□□□ -0.75
CTSA-210ENST00000606000 TPTEP56180 551 aa10.35□□□□□ -0.75
CTSA-210ENST00000606000 LCN2P80188 198 aa10.35□□□□□ -0.75
CTSA-210ENST00000606000 ZNF92Q03936 586 aa10.35□□□□□ -0.75
CTSA-210ENST00000606000 EIF2B1Q14232 305 aaKnown RBP10.35□□□□□ -0.75
CTSA-210ENST00000606000 FAM201AQ5SY85 155 aa10.35□□□□□ -0.75
CTSA-210ENST00000606000 PRAMEF6Q5VXH4 476 aa10.35□□□□□ -0.75
CTSA-210ENST00000606000 SLC27A4Q6P1M0 643 aa10.35□□□□□ -0.75
CTSA-210ENST00000606000 FAHD2BQ6P2I3 314 aaPredicted RBP10.35□□□□□ -0.75
CTSA-210ENST00000606000 PGAP1Q75T13 922 aa10.35□□□□□ -0.75
CTSA-210ENST00000606000 MRPL21Q7Z2W9 205 aaKnown RBP10.35□□□□□ -0.75
CTSA-210ENST00000606000 DPY19L4Q7Z388 723 aa10.35□□□□□ -0.75
CTSA-210ENST00000606000 MOGAT3Q86VF5 341 aa10.35□□□□□ -0.75
CTSA-210ENST00000606000 SPTSSAQ969W0 71 aa10.35□□□□□ -0.75
CTSA-210ENST00000606000 RAB39BQ96DA2 213 aa10.35□□□□□ -0.75
CTSA-210ENST00000606000 FAHD2AQ96GK7 314 aa10.35□□□□□ -0.75
CTSA-210ENST00000606000 INTS14Q96SY0 518 aa10.35□□□□□ -0.75
CTSA-210ENST00000606000 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.35□□□□□ -0.75
CTSA-210ENST00000606000 FBN1P35555 2871 aaKnown RBP10.35□□□□□ -0.75
CTSA-210ENST00000606000 LOC105371242A0A075B767 164 aa10.34□□□□□ -0.75
CTSA-210ENST00000606000 TRAV20A0A0B4J274 112 aa10.34□□□□□ -0.75
CTSA-210ENST00000606000 ZNF878C9JN71 531 aa10.34□□□□□ -0.75
CTSA-210ENST00000606000 TMEM178BH3BS89 294 aa10.34□□□□□ -0.75
CTSA-210ENST00000606000 M0R129 80 aa10.34□□□□□ -0.75
CTSA-210ENST00000606000 MITFO75030 526 aaPredicted RBP10.34□□□□□ -0.75
CTSA-210ENST00000606000 GLCEO94923 617 aa10.34□□□□□ -0.75
CTSA-210ENST00000606000 ZFP36P26651 326 aaKnown RBP10.34□□□□□ -0.75
CTSA-210ENST00000606000 GSTT1P30711 240 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms