RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 ATPIF1Q9UII2 106 aa12.61□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 NOP16Q9Y3C1 178 aaKnown RBP12.61□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 A0A1B0GWJ7 208 aa12.6□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 XKRYO14609 159 aa12.6□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 SAA4P35542 130 aa12.6□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 OR8G1Q15617 311 aa12.6□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 KRT71Q3SY84 523 aa12.6□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 LRRC8CQ8TDW0 803 aa12.6□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 SPRYD4Q8WW59 207 aaPredicted RBP12.6□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 SSX3Q99909 188 aa12.6□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 CCDC167Q9P0B6 97 aa12.6□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 AURKCQ9UQB9 309 aa12.6□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 POLR1DQ9Y2S0 133 aa12.6□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 MAB21L2Q9Y586 359 aa12.6□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 TRBV5-3A0A0A0MS03 114 aa12.59□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 RER1O15258 196 aa12.59□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 CD28P10747 220 aa12.59□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 PRSS12P56730 875 aa12.59□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 PRB3Q04118 309 aaPredicted RBP12.59□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 CCDC92Q53HC0 331 aaPredicted RBP12.59□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 BLOC1S3Q6QNY0 202 aa12.59□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 OR51G2Q8NGK0 314 aa12.59□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 POLR2J2Q9GZM3 115 aaKnown RBP12.59□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 NPFFR1Q9GZQ6 430 aa12.59□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 SLC22A4Q9H015 551 aa12.59□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 POLR2J3Q9H1A7 115 aaKnown RBP12.59□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 RERGLQ9H628 205 aa12.59□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 GRHPRQ9UBQ7 328 aa12.59□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 RIMS3Q9UJD0 308 aa12.59□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 SH3GLB1Q9Y371 365 aa12.59□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 TENM3Q9P273 2699 aa12.59□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 COL7A1Q02388 2944 aa12.58□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 TEX13CA0A0J9YWL9 993 aa12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 hCG_1807616A0A1W2PRN6 198 aa12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 SNNO75324 88 aaPredicted RBP12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 PEX14O75381 377 aa12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 OR5F1O95221 314 aa12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 LSM6P62312 80 aaKnown RBP12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 ECH1Q13011 328 aa12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 MALLQ13021 153 aa12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 KLRD1Q13241 179 aa12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 OTPQ5XKR4 325 aa12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 PGAP1Q75T13 922 aa12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 FAM90A1Q86YD7 464 aa12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 BEND2Q8NDZ0 799 aa12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 OR51A7Q8NH64 312 aa12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 SLC7A13Q8TCU3 470 aa12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 TAMM41Q96BW9 452 aa12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 BPIFA2Q96DR5 249 aa12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 DMRTB1Q96MA1 342 aa12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 ADAT1Q9BUB4 502 aaKnown RBP12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 C1orf123Q9NWV4 160 aa12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 KAAG1Q9UBP8 84 aa12.58□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 A6NLC8 198 aa12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 POLR3GO15318 223 aaPredicted RBP12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 PPP1R3DO95685 299 aa12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 IFI30P13284 250 aa12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 CA6P23280 308 aa12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 RPL4P36578 427 aaKnown RBP12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 ACSM1Q08AH1 577 aa12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 POU4F2Q12837 409 aa12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 PIN1Q13526 163 aaPredicted RBP12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 MPP2Q14168 576 aa12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 GK2Q14410 553 aaPredicted RBP12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 MAVSQ7Z434 540 aa12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 FUNDC1Q8IVP5 155 aa12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 MICU2Q8IYU8 434 aa12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 PNKDQ8N490 385 aa12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 ANKRD42Q8N9B4 389 aa12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 PLPP7Q8NBV4 271 aa12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 LY6G5BQ8NDX9 201 aa12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 GJC3Q8NFK1 279 aa12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 SLCO4A1Q96BD0 722 aa12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 NKX3-1Q99801 234 aaPredicted RBP12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 COQ7Q99807 217 aa12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 HDHD2Q9H0R4 259 aa12.57□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 TRAV27A0A087WT01 109 aa12.56□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 E9PQ18 207 aa12.56□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 AHCYL1O43865 530 aa12.56□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 GMDSO60547 372 aa12.56□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 FCN3O75636 299 aa12.56□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 MSX2P35548 267 aaPredicted RBP12.56□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 UBE2E1P51965 193 aa12.56□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 DLX1P56177 255 aa12.56□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 MICBQ29980 383 aa12.56□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 ANKDD1AQ495B1 522 aa12.56□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 NCR3LG1Q68D85 454 aa12.56□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 SLC36A1Q7Z2H8 476 aa12.56□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 MRPL21Q7Z2W9 205 aaKnown RBP12.56□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 OAFQ86UD1 273 aa12.56□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 GLB1L2Q8IW92 636 aa12.56□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 LRRC75AQ8NAA5 344 aa12.56□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 CITED2Q99967 270 aaPredicted RBP12.56□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 B9D2Q9BPU9 175 aa12.56□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 TMEM109Q9BVC6 243 aa12.56□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 COA3Q9Y2R0 106 aaPredicted RBP12.56□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 IGHV3OR15-7A0A075B7D8 119 aa12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 PRSS37A4D1T9 235 aa12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 HTR3EA5X5Y0 456 aa12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 NDUFB3O43676 98 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms