RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 FZR1Q9UM11 496 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 PCDHGB1Q9Y5G3 927 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 A0A1W2PPW3 197 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 ACOD1A6NK06 481 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 ZNF670-ZNF695F2Z2N8 137 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 J3QRE1 110 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 WBP4O75554 376 aaKnown RBP11.88□□□□□ -0.51
RNF40-212ENST00000602784 MT-ND5P03915 603 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 KITLGP21583 273 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 MPV17P39210 176 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 SLC6A9P48067 706 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 IL5RAQ01344 420 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 MALLQ13021 153 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 PSG7Q13046 419 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 SHEQ5VZ18 495 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 ZNF322Q6U7Q0 402 aaPredicted RBP11.88□□□□□ -0.51
RNF40-212ENST00000602784 LRRN1Q6UXK5 716 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 USP51Q70EK9 711 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 SPATC1Q76KD6 591 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 PRSS45Q7RTY3 260 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 KRT77Q7Z794 578 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 ZNF283Q8N7M2 679 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 OR52H1Q8NGJ2 320 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 APH1BQ8WW43 257 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 CMBLQ96DG6 245 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 RNFT2Q96EX2 444 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 OR8B4Q96RC9 309 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 RAB1BQ9H0U4 201 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 POFUT1Q9H488 388 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 DYNLRB1Q9NP97 96 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 CYSLTR2Q9NS75 346 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 TAAR3PQ9P1P4 343 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 MYEF2Q9P2K5 600 aaKnown RBP11.88□□□□□ -0.51
RNF40-212ENST00000602784 COPS3Q9UNS2 423 aa11.88□□□□□ -0.51
RNF40-212ENST00000602784 EXOGQ9Y2C4 368 aaKnown RBP11.88□□□□□ -0.51
RNF40-212ENST00000602784 RPL36Q9Y3U8 105 aaKnown RBP11.88□□□□□ -0.51
RNF40-212ENST00000602784 PRRC2AP48634 2157 aaKnown RBP11.87□□□□□ -0.51
RNF40-212ENST00000602784 A0A1W2PQL4 384 aaPredicted RBP11.87□□□□□ -0.51
RNF40-212ENST00000602784 CLIC3O95833 236 aa11.87□□□□□ -0.51
RNF40-212ENST00000602784 F12P00748 615 aaPredicted RBP11.87□□□□□ -0.51
RNF40-212ENST00000602784 IGHV4-39P01824 125 aa11.87□□□□□ -0.51
RNF40-212ENST00000602784 ERCC1P07992 297 aaPredicted RBP11.87□□□□□ -0.51
RNF40-212ENST00000602784 ADRA2AP08913 450 aa11.87□□□□□ -0.51
RNF40-212ENST00000602784 CX3CR1P49238 355 aa11.87□□□□□ -0.51
RNF40-212ENST00000602784 EFNA4P52798 201 aa11.87□□□□□ -0.51
RNF40-212ENST00000602784 ZNF121P58317 390 aaPredicted RBP11.87□□□□□ -0.51
RNF40-212ENST00000602784 CXCR4P61073 352 aa11.87□□□□□ -0.51
RNF40-212ENST00000602784 ACTC1P68032 377 aa11.87□□□□□ -0.51
RNF40-212ENST00000602784 ACTA1P68133 377 aa11.87□□□□□ -0.51
RNF40-212ENST00000602784 ZNF91Q05481 1191 aa11.87□□□□□ -0.51
RNF40-212ENST00000602784 NKPD1Q17RQ9 610 aa11.87□□□□□ -0.51
RNF40-212ENST00000602784 ZMAT1Q5H9K5 638 aa11.87□□□□□ -0.51
RNF40-212ENST00000602784 SPNS3Q6ZMD2 512 aa11.87□□□□□ -0.51
RNF40-212ENST00000602784 EGFL6Q8IUX8 553 aa11.87□□□□□ -0.51
RNF40-212ENST00000602784 C8orf59Q8N0T1 100 aaPredicted RBP11.87□□□□□ -0.51
RNF40-212ENST00000602784 SNX33Q8WV41 574 aa11.87□□□□□ -0.51
RNF40-212ENST00000602784 PERPQ96FX8 193 aa11.87□□□□□ -0.51
RNF40-212ENST00000602784 OPA3Q9H6K4 179 aa11.87□□□□□ -0.51
RNF40-212ENST00000602784 NKIRAS2Q9NYR9 191 aa11.87□□□□□ -0.51
RNF40-212ENST00000602784 AASSQ9UDR5 926 aa11.87□□□□□ -0.51
RNF40-212ENST00000602784 PURGQ9UJV8 347 aaKnown RBP11.87□□□□□ -0.51
RNF40-212ENST00000602784 LRP12Q9Y561 859 aa11.87□□□□□ -0.51
RNF40-212ENST00000602784 ITPR3Q14573 2671 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 PLSCR5A0PG75 271 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 PRR32B1ATL7 298 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 XRCC2O43543 280 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 SULT1C4O75897 302 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 FADS2O95864 444 aaKnown RBP11.86□□□□□ -0.51
RNF40-212ENST00000602784 ADH4P08319 380 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 GNAO1P09471 354 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 DBTP11182 482 aaKnown RBP11.86□□□□□ -0.51
RNF40-212ENST00000602784 SELEP16581 610 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 ALDH3B1P43353 468 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 HSPA13P48723 471 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 MMP15P51511 669 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 MMP16P51512 607 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 RIDAP52758 137 aaKnown RBP11.86□□□□□ -0.51
RNF40-212ENST00000602784 AQP4P55087 323 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 PSMA6P60900 246 aaKnown RBP11.86□□□□□ -0.51
RNF40-212ENST00000602784 RAB40BQ12829 278 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 GK2Q14410 553 aaPredicted RBP11.86□□□□□ -0.51
RNF40-212ENST00000602784 HLXQ14774 488 aaPredicted RBP11.86□□□□□ -0.51
RNF40-212ENST00000602784 PCGF3Q3KNV8 242 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 SNAI3Q3KNW1 292 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 KLHL22Q53GT1 634 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 TMEM255AQ5JRV8 349 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 ZNF684Q5T5D7 378 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 KCTD20Q7Z5Y7 419 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 ACBD7Q8N6N7 88 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 OR10H4Q8NGA5 316 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 FBLIM1Q8WUP2 373 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 NEU4Q8WWR8 484 aaPredicted RBP11.86□□□□□ -0.51
RNF40-212ENST00000602784 ITFG2Q969R8 447 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 SPSB4Q96A44 273 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 LGALS12Q96DT0 336 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 MYCBPQ99417 103 aaPredicted RBP11.86□□□□□ -0.51
RNF40-212ENST00000602784 VRK1Q99986 396 aaPredicted RBP11.86□□□□□ -0.51
RNF40-212ENST00000602784 REPIN1Q9BWE0 567 aaKnown RBP11.86□□□□□ -0.51
RNF40-212ENST00000602784 RGCCQ9H4X1 137 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 PTTG3PQ9NZH4 202 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms