RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 PYHIN1Q6K0P9 492 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 VWA1Q6PCB0 445 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 LRRC18Q8N456 261 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 OR13C5Q8NGS8 318 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 OR52N5Q8NH56 324 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 APH1AQ96BI3 265 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 GMPPAQ96IJ6 420 aaPredicted RBP15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 OR8B4Q96RC9 309 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 GDF2Q9UK05 429 aaPredicted RBP15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 FBXL3Q9UKT7 428 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 CACNG2Q9Y698 323 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 TRAV1-2A0A0B4J238 106 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 RER1O15258 196 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 ALX3O95076 343 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 MSR1P21757 451 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 KCNMB1Q16558 191 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 KRTCAP3Q53RY4 240 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 TEX30Q5JUR7 227 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 RIPPLY2Q5TAB7 128 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 LIPNQ5VXI9 398 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 NSUN5P2Q63ZY6 315 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 OR7E24Q6IFN5 339 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 NAXEQ8NCW5 288 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 TMEM38BQ9NVV0 291 aa15.22■□□□□ 0.03
PPFIA3-207ENST00000602716 A0A0A6YYJ9 748 aa15.21■□□□□ 0.03
PPFIA3-207ENST00000602716 AHRRA9YTQ3 701 aa15.21■□□□□ 0.03
PPFIA3-207ENST00000602716 OGG1O15527 345 aa15.21■□□□□ 0.03
PPFIA3-207ENST00000602716 RAB3BP20337 219 aa15.21■□□□□ 0.03
PPFIA3-207ENST00000602716 ANOS1P23352 680 aa15.21■□□□□ 0.03
PPFIA3-207ENST00000602716 SLC36A2Q495M3 483 aa15.21■□□□□ 0.03
PPFIA3-207ENST00000602716 LAMTOR1Q6IAA8 161 aa15.21■□□□□ 0.03
PPFIA3-207ENST00000602716 KLHL24Q6TFL4 600 aa15.21■□□□□ 0.03
PPFIA3-207ENST00000602716 FAM57AQ8TBR7 257 aa15.21■□□□□ 0.03
PPFIA3-207ENST00000602716 CPT1CQ8TCG5 803 aa15.21■□□□□ 0.03
PPFIA3-207ENST00000602716 WNT2BQ93097 391 aa15.21■□□□□ 0.03
PPFIA3-207ENST00000602716 MNTQ99583 582 aa15.21■□□□□ 0.03
PPFIA3-207ENST00000602716 FOXB1Q99853 325 aa15.21■□□□□ 0.03
PPFIA3-207ENST00000602716 LINC00470Q9BZP3 86 aa15.21■□□□□ 0.03
PPFIA3-207ENST00000602716 NELFAQ9H3P2 528 aa15.21■□□□□ 0.03
PPFIA3-207ENST00000602716 ELOVL3Q9HB03 270 aa15.21■□□□□ 0.03
PPFIA3-207ENST00000602716 LRP12Q9Y561 859 aa15.21■□□□□ 0.03
PPFIA3-207ENST00000602716 TMEM14AQ9Y6G1 99 aa15.21■□□□□ 0.03
PPFIA3-207ENST00000602716 NBEAQ8NFP9 2946 aa15.21■□□□□ 0.03
PPFIA3-207ENST00000602716 ACACBO00763 2458 aa15.21■□□□□ 0.02
PPFIA3-207ENST00000602716 SMLR1H3BR10 107 aa15.21■□□□□ 0.02
PPFIA3-207ENST00000602716 PATE4P0C8F1 98 aa15.21■□□□□ 0.02
PPFIA3-207ENST00000602716 ABOP16442 354 aa15.21■□□□□ 0.02
PPFIA3-207ENST00000602716 KIR2DL2P43627 348 aaPredicted RBP15.21■□□□□ 0.02
PPFIA3-207ENST00000602716 ZNF84P51523 738 aa15.21■□□□□ 0.02
PPFIA3-207ENST00000602716 MRPS34P82930 218 aaKnown RBP15.21■□□□□ 0.02
PPFIA3-207ENST00000602716 MFGE8Q08431 387 aaPredicted RBP15.21■□□□□ 0.02
PPFIA3-207ENST00000602716 KLRB1Q12918 225 aa15.21■□□□□ 0.02
PPFIA3-207ENST00000602716 ZNF100Q8IYN0 542 aa15.21■□□□□ 0.02
PPFIA3-207ENST00000602716 OR5H6Q8NGV6 325 aa15.21■□□□□ 0.02
PPFIA3-207ENST00000602716 FGFBP3Q8TAT2 258 aa15.21■□□□□ 0.02
PPFIA3-207ENST00000602716 DEDD2Q8WXF8 326 aa15.21■□□□□ 0.02
PPFIA3-207ENST00000602716 FBXO17Q96EF6 278 aa15.21■□□□□ 0.02
PPFIA3-207ENST00000602716 ZCCHC4Q9H5U6 513 aa15.21■□□□□ 0.02
PPFIA3-207ENST00000602716 PNRC2Q9NPJ4 139 aaKnown RBP15.21■□□□□ 0.02
PPFIA3-207ENST00000602716 PARPBPQ9NWS1 579 aa15.21■□□□□ 0.02
PPFIA3-207ENST00000602716 KRT33AO76009 404 aa15.2■□□□□ 0.02
PPFIA3-207ENST00000602716 SERPINA3P01011 423 aa15.2■□□□□ 0.02
PPFIA3-207ENST00000602716 EGR3Q06889 387 aa15.2■□□□□ 0.02
PPFIA3-207ENST00000602716 MRPL28Q13084 256 aaKnown RBP15.2■□□□□ 0.02
PPFIA3-207ENST00000602716 CDK5R1Q15078 307 aa15.2■□□□□ 0.02
PPFIA3-207ENST00000602716 CEP78Q5JTW2 689 aa15.2■□□□□ 0.02
PPFIA3-207ENST00000602716 C1orf185Q5T7R7 199 aa15.2■□□□□ 0.02
PPFIA3-207ENST00000602716 GFRALQ6UXV0 394 aa15.2■□□□□ 0.02
PPFIA3-207ENST00000602716 TFAP2EQ6VUC0 442 aa15.2■□□□□ 0.02
PPFIA3-207ENST00000602716 FAM214BQ7L5A3 538 aa15.2■□□□□ 0.02
PPFIA3-207ENST00000602716 CNEP1R1Q8N9A8 125 aa15.2■□□□□ 0.02
PPFIA3-207ENST00000602716 ZNF454Q8N9F8 522 aa15.2■□□□□ 0.02
PPFIA3-207ENST00000602716 HAVCR2Q8TDQ0 301 aa15.2■□□□□ 0.02
PPFIA3-207ENST00000602716 PHF3Q92576 2039 aaKnown RBP15.2■□□□□ 0.02
PPFIA3-207ENST00000602716 SLAMF6Q96DU3 332 aa15.2■□□□□ 0.02
PPFIA3-207ENST00000602716 SMIM19Q96E16 107 aa15.2■□□□□ 0.02
PPFIA3-207ENST00000602716 TINAGQ9UJW2 476 aa15.2■□□□□ 0.02
PPFIA3-207ENST00000602716 MED12LQ86YW9 2145 aa15.2■□□□□ 0.02
PPFIA3-207ENST00000602716 MAP1BP46821 2468 aaKnown RBP15.2■□□□□ 0.02
PPFIA3-207ENST00000602716 FREM1Q5H8C1 2179 aa15.2■□□□□ 0.02
PPFIA3-207ENST00000602716 C7orf66A4D0T2 115 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 MBD3L4A6NDZ8 208 aaPredicted RBP15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 MBD3L3A6NE82 208 aaPredicted RBP15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 MBD3L5A6NJ08 208 aaPredicted RBP15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 NOTOA8MTQ0 251 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 AKR7A2O43488 359 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 ATF1P18846 271 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 OR3A2P47893 321 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 SRP9P49458 86 aaKnown RBP15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 GDI2P50395 445 aaKnown RBP15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 ARF1P84077 181 aaKnown RBP15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 ROM1Q03395 351 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 BCL2L15Q5TBC7 163 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 MBD3L2Q8NHZ7 208 aaPredicted RBP15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 RNF133Q8WVZ7 376 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 YIPF5Q969M3 257 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 GP6Q9HCN6 339 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 CENPMQ9NSP4 180 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 ABRACLQ9P1F3 81 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 PHYHO14832 338 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms