RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 RPRD1BQ9NQG5 326 aaKnown RBP10.99□□□□□ -0.65
RPS28-204ENST00000602140 V9GYQ6 96 aa10.99□□□□□ -0.65
RPS28-204ENST00000602140 KIR2DS1A0A191URI9 304 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 MDFIC2A0A1B0GVS7 189 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 LCATP04180 440 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 IRF2P14316 349 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 HIST1H1CP16403 213 aaKnown RBP10.98□□□□□ -0.65
RPS28-204ENST00000602140 SLC6A6P31641 620 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 GATA4P43694 442 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 TRAP1Q12931 704 aaKnown RBP10.98□□□□□ -0.65
RPS28-204ENST00000602140 ECH1Q13011 328 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 MAB21L1Q13394 359 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 KRTAP27-1Q3LI81 207 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 LYPD2Q6UXB3 125 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 FITM2Q8N6M3 262 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 RNF148Q8N7C7 305 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 C19orf18Q8NEA5 215 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 OR2AJ1Q8NGZ0 328 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 SLCO4A1Q96BD0 722 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 ATF6BQ99941 703 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 NUDT16L1Q9BRJ7 211 aaKnown RBP10.98□□□□□ -0.65
RPS28-204ENST00000602140 IFT27Q9BW83 186 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 CDADC1Q9BWV3 514 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 FN3KQ9H479 309 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 SPAG4Q9NPE6 437 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 ZNF446Q9NWS9 450 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 CLN8Q9UBY8 286 aa10.98□□□□□ -0.65
RPS28-204ENST00000602140 POM121CA8CG34 1229 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 ARPC3O15145 178 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 GMNNO75496 209 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 GADD45GO95257 159 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 HLA-DQA2P01906 255 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 NOS3P29474 1203 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 SMIM11AP58511 58 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 SPIBQ01892 262 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 MALLQ13021 153 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 SLC36A3Q495N2 470 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 PRAMEF6Q5VXH4 476 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 WDR25Q64LD2 544 aaPredicted RBP10.97□□□□□ -0.65
RPS28-204ENST00000602140 BRD3OSQ6XYD6 125 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 DCDC5Q6ZRR9 648 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 PGAP1Q75T13 922 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 ZBTB46Q86UZ6 589 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 CELF2-AS1Q8N7Q2 184 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 SDR9C7Q8NEX9 313 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 OR10S1Q8NGN2 331 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 OR11L1Q8NGX0 322 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 SPRYD4Q8WW59 207 aaPredicted RBP10.97□□□□□ -0.65
RPS28-204ENST00000602140 ERGIC1Q969X5 290 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 CMTM5Q96DZ9 223 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 PNRC2Q9NPJ4 139 aaKnown RBP10.97□□□□□ -0.65
RPS28-204ENST00000602140 UFSP2Q9NUQ7 469 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 ADA2Q9NZK5 511 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 CYB5R1Q9UHQ9 305 aa10.97□□□□□ -0.65
RPS28-204ENST00000602140 OR6C68A6NDL8 312 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 PHYHO14832 338 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 HOXA3O43365 443 aaPredicted RBP10.96□□□□□ -0.65
RPS28-204ENST00000602140 OR10H3O60404 316 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 FAM20BO75063 409 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 MDKP21741 143 aaPredicted RBP10.96□□□□□ -0.65
RPS28-204ENST00000602140 OMGP23515 440 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 GGT2P36268 569 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 CD200P41217 278 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 RAD23AP54725 363 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 TPTEP56180 551 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 FGF12P61328 243 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 HOXA4Q00056 320 aaPredicted RBP10.96□□□□□ -0.65
RPS28-204ENST00000602140 MPPED2Q15777 294 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 DEFB112Q30KQ8 113 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 CLEC12AQ5QGZ9 265 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 SLC35F1Q5T1Q4 408 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 C16orf87Q6PH81 154 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 ZNF841Q6ZN19 808 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 SPATC1Q76KD6 591 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 MRPL21Q7Z2W9 205 aaKnown RBP10.96□□□□□ -0.65
RPS28-204ENST00000602140 Q8TCH9 128 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 ZDHHC16Q969W1 377 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 TMIGD2Q96BF3 282 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 PYURFQ96I23 114 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 MAP6Q96JE9 813 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 GORASP2Q9H8Y8 452 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 MRPL22Q9NWU5 206 aaKnown RBP10.96□□□□□ -0.65
RPS28-204ENST00000602140 TMCC3Q9ULS5 477 aa10.96□□□□□ -0.65
RPS28-204ENST00000602140 TRRAPQ9Y4A5 3859 aa10.95□□□□□ -0.66
RPS28-204ENST00000602140 C22orf46C9J442 243 aa10.95□□□□□ -0.66
RPS28-204ENST00000602140 M0R135 149 aa10.95□□□□□ -0.66
RPS28-204ENST00000602140 IDH3BO43837 385 aa10.95□□□□□ -0.66
RPS28-204ENST00000602140 SEMG1P04279 462 aa10.95□□□□□ -0.66
RPS28-204ENST00000602140 CA6P23280 308 aa10.95□□□□□ -0.66
RPS28-204ENST00000602140 PSMB10P40306 273 aa10.95□□□□□ -0.66
RPS28-204ENST00000602140 OR8G1Q15617 311 aa10.95□□□□□ -0.66
RPS28-204ENST00000602140 HSP90B2PQ58FF3 399 aa10.95□□□□□ -0.66
RPS28-204ENST00000602140 GPR157Q5UAW9 335 aa10.95□□□□□ -0.66
RPS28-204ENST00000602140 SFRP4Q6FHJ7 346 aaPredicted RBP10.95□□□□□ -0.66
RPS28-204ENST00000602140 TREML4Q6UXN2 200 aa10.95□□□□□ -0.66
RPS28-204ENST00000602140 BOLLQ8N9W6 283 aaKnown RBP10.95□□□□□ -0.66
RPS28-204ENST00000602140 MCUR1Q96AQ8 359 aa10.95□□□□□ -0.66
RPS28-204ENST00000602140 ZNF799Q96GE5 643 aa10.95□□□□□ -0.66
RPS28-204ENST00000602140 TECTBQ96PL2 329 aa10.95□□□□□ -0.66
RPS28-204ENST00000602140 NSRP1Q9H0G5 558 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms