RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 NDUFS8O00217 210 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 TPD52L2O43399 206 aaKnown RBP12.94□□□□□ -0.34
LIG1-219ENST00000600055 CDC14BO60729 498 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 LILRA1O75019 489 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 LYNP07948 512 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 OPRL1P41146 370 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 NR4A2P43354 598 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 CX3CR1P49238 355 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 GRB2P62993 217 aaKnown RBP12.94□□□□□ -0.34
LIG1-219ENST00000600055 KRTAP1-1Q07627 177 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 HNRNPA0Q13151 305 aaKnown RBP12.94□□□□□ -0.34
LIG1-219ENST00000600055 GK2Q14410 553 aaPredicted RBP12.94□□□□□ -0.34
LIG1-219ENST00000600055 PCGF3Q3KNV8 242 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 NXNL2Q5VZ03 156 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 DRAM2Q6UX65 266 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 MEPCEQ7L2J0 689 aaKnown RBP12.94□□□□□ -0.34
LIG1-219ENST00000600055 SLC16A9Q7RTY1 509 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 ZNF283Q8N7M2 679 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 RDH5Q92781 318 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 UBE2FQ969M7 185 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 MBOAT4Q96T53 435 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 CYSLTR2Q9NS75 346 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 DECR2Q9NUI1 292 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 NKIRAS2Q9NYR9 191 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 DNAJC27Q9NZQ0 273 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 H2AFY2Q9P0M6 372 aaPredicted RBP12.94□□□□□ -0.34
LIG1-219ENST00000600055 ORC6Q9Y5N6 252 aa12.94□□□□□ -0.34
LIG1-219ENST00000600055 FLNAP21333 2647 aaKnown RBP12.93□□□□□ -0.34
LIG1-219ENST00000600055 ACANP16112 2415 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 IGHV4-61A0A0C4DH41 118 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 E9PQ18 207 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 H2BFMP0C1H6 154 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 ALOX5APP20292 161 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 GIFP27352 417 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 HSD11B1P28845 292 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 RBMXP38159 391 aaKnown RBP12.93□□□□□ -0.34
LIG1-219ENST00000600055 LIPAP38571 399 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 SLC15A1P46059 708 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 RAD23AP54725 363 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 CDK5R2Q13319 367 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 RIN1Q13671 783 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 GGTLC2Q14390 218 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 GLYATL3Q5SZD4 288 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 LCN1P1Q5VSP4 162 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 LRRN1Q6UXK5 716 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 ZBTB49Q6ZSB9 765 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 ZNF454Q8N9F8 522 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 OR2AE1Q8NHA4 323 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 FAM81AQ8TBF8 368 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 TTTY10Q9BZA0 68 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 YIPF3Q9GZM5 350 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 TOR3AQ9H497 397 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 TREM2Q9NZC2 230 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 LAMP5Q9UJQ1 280 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 COPS3Q9UNS2 423 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 CACNG2Q9Y698 323 aa12.93□□□□□ -0.34
LIG1-219ENST00000600055 TEP1Q99973 2627 aaKnown RBP12.92□□□□□ -0.34
LIG1-219ENST00000600055 PRR32B1ATL7 298 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 PSMD9O00233 223 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 RP2O75695 350 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 ADH4P08319 380 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 ACHEP22303 614 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 USF1P22415 310 aaPredicted RBP12.92□□□□□ -0.34
LIG1-219ENST00000600055 ZNF92Q03936 586 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 LOXL1Q08397 574 aaPredicted RBP12.92□□□□□ -0.34
LIG1-219ENST00000600055 MALLQ13021 153 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 TRIP10Q15642 601 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 FAM209AQ5JX71 171 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 USP51Q70EK9 711 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 PGAP1Q75T13 922 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 RFLNBQ8N5W9 214 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 BHLHE23Q8NDY6 225 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 OR8G5Q8NG78 346 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 OR2Z1Q8NG97 314 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 EME1Q96AY2 570 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 HRASLS5Q96KN8 279 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 CNN2Q99439 309 aaKnown RBP12.92□□□□□ -0.34
LIG1-219ENST00000600055 CHODLQ9H9P2 273 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 SAP30LQ9HAJ7 183 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 BRD7Q9NPI1 651 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 ZNF275Q9NSD4 429 aaPredicted RBP12.92□□□□□ -0.34
LIG1-219ENST00000600055 CGGBP1Q9UFW8 167 aaPredicted RBP12.92□□□□□ -0.34
LIG1-219ENST00000600055 ZDHHC8Q9ULC8 765 aa12.92□□□□□ -0.34
LIG1-219ENST00000600055 IGHV1-69-2A0A0G2JMI3 117 aa12.91□□□□□ -0.34
LIG1-219ENST00000600055 SLC22A31A6NKX4 558 aa12.91□□□□□ -0.34
LIG1-219ENST00000600055 IQCF6A8MYZ5 107 aa12.91□□□□□ -0.34
LIG1-219ENST00000600055 H0YL77 283 aa12.91□□□□□ -0.34
LIG1-219ENST00000600055 TBX1O43435 398 aa12.91□□□□□ -0.34
LIG1-219ENST00000600055 HEXAP06865 529 aa12.91□□□□□ -0.34
LIG1-219ENST00000600055 ANXA2P07355 339 aaKnown RBP12.91□□□□□ -0.34
LIG1-219ENST00000600055 CRYBB2P43320 205 aa12.91□□□□□ -0.34
LIG1-219ENST00000600055 ZNF121P58317 390 aaPredicted RBP12.91□□□□□ -0.34
LIG1-219ENST00000600055 CDC42P60953 191 aa12.91□□□□□ -0.34
LIG1-219ENST00000600055 MRPS11P82912 194 aaKnown RBP12.91□□□□□ -0.34
LIG1-219ENST00000600055 TNFAIP6P98066 277 aaPredicted RBP12.91□□□□□ -0.34
LIG1-219ENST00000600055 RCN1Q15293 331 aa12.91□□□□□ -0.34
LIG1-219ENST00000600055 ZMAT1Q5H9K5 638 aa12.91□□□□□ -0.34
LIG1-219ENST00000600055 FAM57BQ71RH2 274 aa12.91□□□□□ -0.34
LIG1-219ENST00000600055 PRSS45Q7RTY3 260 aa12.91□□□□□ -0.34
LIG1-219ENST00000600055 MRPL21Q7Z2W9 205 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms