RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 DYNC2LI1Q8TCX1 351 aa13.24□□□□□ -0.29
SYMPK-213ENST00000599460 MFFQ9GZY8 342 aa13.24□□□□□ -0.29
SYMPK-213ENST00000599460 PDCD11Q14690 1871 aaKnown RBP13.24□□□□□ -0.29
SYMPK-213ENST00000599460 PTBP1P26599 531 aaKnown RBP eCLIP13.23□□□□□ -0.29
SYMPK-213ENST00000599460 TAS2R20P59543 309 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 CATR1Q13166 79 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 C1QL3Q5VWW1 255 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 POLDIP2Q9Y2S7 368 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 NUP214P35658 2090 aaPredicted RBP13.23□□□□□ -0.29
SYMPK-213ENST00000599460 ARPC4-TTLL3A0A0A6YYG9 625 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 OR2M5A3KFT3 312 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 SPDEFO95238 335 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 GSG1Q2KHT4 349 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 PLXDC2Q6UX71 529 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 GDPD3Q7L5L3 318 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 FJX1Q86VR8 437 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 GTPBP8Q8N3Z3 284 aaPredicted RBP13.23□□□□□ -0.29
SYMPK-213ENST00000599460 LSMEM1Q8N8F7 131 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 BHLHE40O14503 412 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 CAMLGP49069 296 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 ZNF136P52737 540 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 C2orf76Q3KRA6 126 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 DMRTC1Q5HYR2 192 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 DCAF10Q5QP82 559 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 ZDHHC23Q8IYP9 409 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 SNX18Q96RF0 628 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 A0A1B0GV50 99 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 RPP30P78346 268 aaKnown RBP13.23□□□□□ -0.29
SYMPK-213ENST00000599460 SPATA46Q5T0L3 261 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 MRPL41Q8IXM3 137 aaKnown RBP13.23□□□□□ -0.29
SYMPK-213ENST00000599460 EIF5A2Q9GZV4 153 aaKnown RBP13.23□□□□□ -0.29
SYMPK-213ENST00000599460 ADGRL4Q9HBW9 690 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 SCN3AQ9NY46 2000 aa13.23□□□□□ -0.29
SYMPK-213ENST00000599460 RPL23AP62750 156 aaKnown RBP13.22□□□□□ -0.29
SYMPK-213ENST00000599460 ZNF718Q3SXZ3 478 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 FAM27D1Q5T7N8 215 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 ZNF573Q86YE8 665 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 FBXL2Q9UKC9 423 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 PRSS23O95084 383 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 FTH1P19P0C7X4 201 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 MAGEA5P43359 124 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 LPCAT3Q6P1A2 487 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 RER1O15258 196 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 SPINT2O43291 252 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 CCR9P51686 369 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 MFGE8Q08431 387 aaPredicted RBP13.22□□□□□ -0.29
SYMPK-213ENST00000599460 FOXB2Q5VYV0 432 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 SLC23A3Q6PIS1 610 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 OR56B2PQ8NGI1 322 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 OR52I2Q8NH67 350 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 GABARAPH6UMI1 98 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 FAHP16930 419 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 ZNF169Q14929 603 aaPredicted RBP13.22□□□□□ -0.29
SYMPK-213ENST00000599460 RAB35Q15286 201 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 ZXDCQ2QGD7 858 aaPredicted RBP13.22□□□□□ -0.29
SYMPK-213ENST00000599460 APOBEC4Q8WW27 367 aaKnown RBP13.22□□□□□ -0.29
SYMPK-213ENST00000599460 EXOGQ9Y2C4 368 aaKnown RBP13.22□□□□□ -0.29
SYMPK-213ENST00000599460 MN1Q10571 1320 aaPredicted RBP13.22□□□□□ -0.29
SYMPK-213ENST00000599460 CEBPZOSA8MTT3 80 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 EIF4EP06730 217 aaKnown RBP13.22□□□□□ -0.29
SYMPK-213ENST00000599460 KIR2DL3P43628 341 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 NPY4RP50391 375 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 CPEB3Q8NE35 698 aaKnown RBP13.22□□□□□ -0.29
SYMPK-213ENST00000599460 C1orf123Q9NWV4 160 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 TP53TG5Q9Y2B4 290 aa13.22□□□□□ -0.29
SYMPK-213ENST00000599460 A0A1W2PR80 420 aa13.21□□□□□ -0.29
SYMPK-213ENST00000599460 C4orf51C9J302 202 aa13.21□□□□□ -0.29
SYMPK-213ENST00000599460 IFNA17P01571 189 aa13.21□□□□□ -0.29
SYMPK-213ENST00000599460 HAAOP46952 286 aa13.21□□□□□ -0.29
SYMPK-213ENST00000599460 SLC7A5P1Q8MH63 180 aa13.21□□□□□ -0.29
SYMPK-213ENST00000599460 OR1J1Q8NGS3 322 aa13.21□□□□□ -0.29
SYMPK-213ENST00000599460 APOBEC3DQ96AK3 386 aaPredicted RBP13.21□□□□□ -0.29
SYMPK-213ENST00000599460 C20orf85Q9H1P6 137 aa13.21□□□□□ -0.29
SYMPK-213ENST00000599460 MSMO1Q15800 293 aa13.21□□□□□ -0.29
SYMPK-213ENST00000599460 PRSS53Q2L4Q9 553 aa13.21□□□□□ -0.29
SYMPK-213ENST00000599460 AKR1C8PQ5T2L2 129 aa13.21□□□□□ -0.29
SYMPK-213ENST00000599460 ADGRG3Q86Y34 549 aa13.21□□□□□ -0.29
SYMPK-213ENST00000599460 CMTM4Q8IZR5 234 aa13.21□□□□□ -0.29
SYMPK-213ENST00000599460 CELF2-AS1Q8N7Q2 184 aa13.21□□□□□ -0.29
SYMPK-213ENST00000599460 DMBX1Q8NFW5 382 aa13.21□□□□□ -0.29
SYMPK-213ENST00000599460 EFSO43281 561 aa13.21□□□□□ -0.3
SYMPK-213ENST00000599460 IFNA2P01563 188 aa13.21□□□□□ -0.3
SYMPK-213ENST00000599460 IGKV1D-16P01601 117 aa13.21□□□□□ -0.3
SYMPK-213ENST00000599460 CTSBP07858 339 aa13.21□□□□□ -0.3
SYMPK-213ENST00000599460 ANKRD34CP0C6C1 535 aa13.21□□□□□ -0.3
SYMPK-213ENST00000599460 NDUFB7P17568 137 aa13.21□□□□□ -0.3
SYMPK-213ENST00000599460 GLRA1P23415 457 aa13.21□□□□□ -0.3
SYMPK-213ENST00000599460 PTPN6P29350 595 aa13.21□□□□□ -0.3
SYMPK-213ENST00000599460 ZFP36L2P47974 494 aaKnown RBP13.21□□□□□ -0.3
SYMPK-213ENST00000599460 PDZD9Q8IXQ8 264 aa13.21□□□□□ -0.3
SYMPK-213ENST00000599460 METTL17Q9H7H0 456 aaPredicted RBP13.21□□□□□ -0.3
SYMPK-213ENST00000599460 CENPVL1A0A0U1RR11 272 aa13.21□□□□□ -0.3
SYMPK-213ENST00000599460 SIRPB1O00241 398 aa13.21□□□□□ -0.3
SYMPK-213ENST00000599460 PRICKLE3O43900 615 aaPredicted RBP13.21□□□□□ -0.3
SYMPK-213ENST00000599460 MLF1P58340 268 aa13.21□□□□□ -0.3
SYMPK-213ENST00000599460 RAC3P60763 192 aa13.21□□□□□ -0.3
SYMPK-213ENST00000599460 DGCR2P98153 550 aa13.21□□□□□ -0.3
SYMPK-213ENST00000599460 TMEM185AQ8NFB2 350 aa13.21□□□□□ -0.3
SYMPK-213ENST00000599460 OR51S1Q8NGJ8 323 aa13.21□□□□□ -0.3
SYMPK-213ENST00000599460 APH1BQ8WW43 257 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms