RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 C8orf59Q8N0T1 100 aaPredicted RBP11.65□□□□□ -0.54
SCAF1-203ENST00000598359 OR5AS1Q8N127 324 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 NPEPL1Q8NDH3 523 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 ZNF555Q8NEP9 628 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 OR2Z1Q8NG97 314 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 GNPDA2Q8TDQ7 276 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 TMEM186Q96B77 213 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 WACQ9BTA9 647 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 EGLN1Q9GZT9 426 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 WDR76Q9H967 626 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 CYSLTR2Q9NS75 346 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 ORC6Q9Y5N6 252 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 LYVE1Q9Y5Y7 322 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 HSPE1-MOB4S4R3N1 261 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 A0A087WXM4 84 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 ISPDA4D126 451 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 HAX1O00165 279 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 TNFRSF11BO00300 401 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 ARPC3O15145 178 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 RENP00797 406 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 IGHV2-5P01817 119 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 NOS3P29474 1203 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 PYCR1P32322 319 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 DAPP51397 102 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 HIST1H3AP68431 136 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 TSPAN31Q12999 210 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 CDK5R2Q13319 367 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 RSPO1Q2MKA7 263 aaPredicted RBP11.64□□□□□ -0.55
SCAF1-203ENST00000598359 ZIK1Q3SY52 487 aaPredicted RBP11.64□□□□□ -0.55
SCAF1-203ENST00000598359 RBM48Q5RL73 367 aaKnown RBP11.64□□□□□ -0.55
SCAF1-203ENST00000598359 HIST2H3PS2Q5TEC6 136 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 ZNF691Q5VV52 312 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 FAHD2BQ6P2I3 314 aaPredicted RBP11.64□□□□□ -0.55
SCAF1-203ENST00000598359 DNM1P34Q6PK57 102 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 CFAP77Q6ZQR2 320 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 HIST2H3AQ71DI3 136 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 C1orf174Q8IYL3 243 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 CYB561A3Q8NBI2 242 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 SLC26A10Q8NG04 563 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 OR52E2Q8NGJ4 325 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 OR8D4Q8NGM9 314 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 OR51F2Q8NH61 342 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 RAB1CQ92928 201 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 FAHD2AQ96GK7 314 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 DCLRE1CQ96SD1 692 aaKnown RBP11.64□□□□□ -0.55
SCAF1-203ENST00000598359 PITX2Q99697 317 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 GABARAPL3Q9BY60 117 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 PLA2G12AQ9BZM1 189 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 RBM38Q9H0Z9 239 aaKnown RBP11.64□□□□□ -0.55
SCAF1-203ENST00000598359 PDP1Q9P0J1 537 aaPredicted RBP11.64□□□□□ -0.55
SCAF1-203ENST00000598359 U3KQV3 271 aa11.64□□□□□ -0.55
SCAF1-203ENST00000598359 IGHV3-64DA0A0J9YX35 117 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 LOC100130705A0A1B0GUX0 176 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 PLPP2O43688 288 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 CLIC3O95833 236 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 GASTP01350 101 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 CD55P08174 381 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 ADH4P08319 380 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 KITLGP21583 273 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 PRKACGP22612 351 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 IFNGR2P38484 337 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 LIPAP38571 399 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 RPS27P42677 84 aaKnown RBP11.63□□□□□ -0.55
SCAF1-203ENST00000598359 GABARAPL2P60520 117 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.63□□□□□ -0.55
SCAF1-203ENST00000598359 OR2T2Q6IF00 324 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 ACSM5Q6NUN0 579 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 LYPD4Q6UWN0 246 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 GJC3Q8NFK1 279 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 ITLN1Q8WWA0 313 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 ZNRF4Q8WWF5 429 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 HAVCR1Q96D42 359 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 TIMD4Q96H15 378 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 GAL3ST1Q99999 423 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 C19orf24Q9BVV8 132 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 METTL17Q9H7H0 456 aaPredicted RBP11.63□□□□□ -0.55
SCAF1-203ENST00000598359 ZDHHC8Q9ULC8 765 aa11.63□□□□□ -0.55
SCAF1-203ENST00000598359 TVP23AA6NH52 213 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 RGS9O75916 674 aaPredicted RBP11.62□□□□□ -0.55
SCAF1-203ENST00000598359 AVPP01185 164 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 HLA-DQA2P01906 255 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 SBK2P0C263 348 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 PSKH1P11801 424 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 ANXA8P13928 327 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 THBS2P35442 1172 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 ISL1P61371 349 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 COX10Q12887 443 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 ZMAT1Q5H9K5 638 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 ZNF770Q6IQ21 691 aaPredicted RBP11.62□□□□□ -0.55
SCAF1-203ENST00000598359 SLC18B1Q6NT16 456 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 C1orf229Q6ZS94 237 aaPredicted RBP11.62□□□□□ -0.55
SCAF1-203ENST00000598359 NAA40Q86UY6 237 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 ZBTB46Q86UZ6 589 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 SATL1Q86VE3 508 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 BHLHE23Q8NDY6 225 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 SETD9Q8NE22 299 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 OR10AD1Q8NGE0 317 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 OR51L1Q8NGJ5 315 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 GIPC3Q8TF64 312 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 PTP4A1Q93096 173 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms