RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 RNF166Q96A37 237 aaPredicted RBP11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 C12orf43Q96C57 262 aaKnown RBP11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 C4orf45Q96LM5 186 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 HDHD5Q9BXW7 423 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 SP140LQ9H930 580 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 ZNF281Q9Y2X9 895 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 DIDO1Q9BTC0 2240 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 OR6C6A6NF89 314 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 ACOD1A6NK06 481 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 TMEM212A6NML5 194 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 EEF1E1-BLOC1S5C9J1V9 151 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 PRSS44E7EML9 344 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 LRRTM2O43300 516 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 EEF1E1O43324 174 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 SYNGR3O43761 229 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 SRSF10O75494 262 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 RGS9O75916 674 aaPredicted RBP11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 ANXA2P07355 339 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 COX5BP10606 129 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 COX5AP20674 150 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 GALP22466 123 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 IL32P24001 234 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 VBP1P61758 197 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 TUBA1BP68363 451 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 FABP5Q01469 135 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 MFGE8Q08431 387 aaPredicted RBP11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 TSC22D1Q15714 1073 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 CTF1Q16619 201 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 GSG1Q2KHT4 349 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 ACSM3Q53FZ2 586 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 WDR38Q5JTN6 314 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 BCL2L15Q5TBC7 163 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 ZNF704Q6ZNC4 412 aaPredicted RBP11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 SLC16A12Q6ZSM3 486 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 NCCRP1Q6ZVX7 275 aaPredicted RBP11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 TUBA1AQ71U36 451 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 CEACAM19Q7Z692 300 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 MRGPRGQ86SM5 289 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 PRSS35Q8N3Z0 413 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 RPS4Y2Q8TD47 263 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 HSD17B8Q92506 261 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 RPL3LQ92901 407 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 PPP1R14AQ96A00 147 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 PGAM5Q96HS1 289 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 BOD1Q96IK1 185 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 PGLYRP3Q96LB9 341 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 DOK1Q99704 481 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 PDCD1LG2Q9BQ51 273 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 PBOV1Q9GZY1 135 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 SLC17A5Q9NRA2 495 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 ELOVL5Q9NYP7 299 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 ZNF224Q9NZL3 707 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 SLC22A13Q9Y226 551 aa11.38□□□□□ -0.59
SHKBP1-209ENST00000595803 A0A1B0GUH1 482 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 OR4C45A6NMZ5 311 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 H3BMQ9 156 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 M0R135 149 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 GABRPO00591 440 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 ZFPL1O95159 310 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 KIR3DL2P43630 455 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 SLC6A9P48067 706 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 ZNF121P58317 390 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 PSMA6P60900 246 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 ODF4Q2M2E3 257 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 RSPO1Q2MKA7 263 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 CNPY1Q3B7I2 92 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 YIF1BQ5BJH7 314 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 TMEM244Q5VVB8 128 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 DRAM2Q6UX65 266 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 PAMR1Q6UXH9 720 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 FAM57BQ71RH2 274 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 NAA40Q86UY6 237 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 LIX1LQ8IVB5 337 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 C17orf78Q8N4C9 275 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 CPEB3Q8NE35 698 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 ZNF799Q96GE5 643 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 CENPOQ9BU64 300 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 MOB1AQ9H8S9 216 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 OBP2BQ9NPH6 170 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 G6PC2Q9NQR9 355 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 TXNL4BQ9NX01 149 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 FAM206AQ9NX38 181 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 B3GNT2Q9NY97 397 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 COQ3Q9NZJ6 369 aa11.37□□□□□ -0.59
SHKBP1-209ENST00000595803 ARPC4-TTLL3A0A0A6YYG9 625 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 A0A1W2PR80 420 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 SLC22A1O15245 554 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 GATBO75879 557 aaKnown RBP11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 LCATP04180 440 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 DBHP09172 617 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 SLC2A1P11166 492 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 CBR1P16152 277 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 CCNOP22674 350 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 STOMP27105 288 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 APEX1P27695 318 aaKnown RBP11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 FGF9P31371 208 aaPredicted RBP11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 APLNRP35414 380 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 UGT2B10P36537 528 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 NCS1P62166 190 aa11.36□□□□□ -0.59
SHKBP1-209ENST00000595803 C22orf42Q6IC83 251 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms