RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 LRFN5Q96NI6 719 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 TUBA4BQ9H853 241 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 TAS2R10Q9NYW0 307 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 ZMIZ1Q9ULJ6 1067 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 MOKQ9UQ07 419 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 COL27A1Q8IZC6 1860 aaPredicted RBP13.76□□□□□ -0.21
PNKP-204ENST00000594661 TRBV11-1A0A0K0K1C0 115 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 FLRT2O43155 660 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 FADS1O60427 444 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 UCHL1P09936 223 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 ZNF883P0CG24 379 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 PCP4P48539 62 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 OR12D2P58182 307 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 UBE2MP61081 183 aaKnown RBP13.75□□□□□ -0.21
PNKP-204ENST00000594661 PJVKQ0ZLH3 352 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 ACSM3Q53FZ2 586 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 TMEM205Q6UW68 189 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 ZNF563Q8TA94 476 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 TTTY10Q9BZA0 68 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 R4GN57 208 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 RNF222A6NCQ9 220 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 BTBD17A6NE02 478 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 ADAM10O14672 748 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 PAX1P15863 534 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 DDTP30046 118 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 DCTDP32321 178 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 PTH2RP49190 550 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 F2RL1P55085 397 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 EGR4Q05215 589 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 RBM39Q14498 530 aaKnown RBP13.75□□□□□ -0.21
PNKP-204ENST00000594661 LY6G6FQ5SQ64 297 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 ATPAF1Q5TC12 328 aaPredicted RBP13.75□□□□□ -0.21
PNKP-204ENST00000594661 C11orf88Q6PI97 169 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 SSX6Q7RTT6 188 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 GTPBP8Q8N3Z3 284 aaPredicted RBP13.75□□□□□ -0.21
PNKP-204ENST00000594661 STOML3Q8TAV4 291 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 TNFAIP8L1Q8WVP5 186 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 CCNL2Q96S94 520 aaPredicted RBP13.75□□□□□ -0.21
PNKP-204ENST00000594661 NMNAT3Q96T66 252 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 LPAR4Q99677 370 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 SPOCK3Q9BQ16 436 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 PISDQ9UG56 409 aa13.75□□□□□ -0.21
PNKP-204ENST00000594661 KIF26BQ2KJY2 2108 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 RBBP9O75884 186 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 WISP1O95388 367 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 HOXB5P09067 269 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 HOXA5P20719 270 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 TACR3P29371 465 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 CEACAM6P40199 344 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 NAA10P41227 235 aaPredicted RBP13.74□□□□□ -0.21
PNKP-204ENST00000594661 P2RX1P51575 399 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 FBXW4P57775 412 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 TAS2R43P59537 309 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 PRPS1P60891 318 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 RPS4XP62701 263 aaKnown RBP13.74□□□□□ -0.21
PNKP-204ENST00000594661 PLA2G2CQ5R387 149 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 RPTNQ6XPR3 784 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 ACOT7LQ6ZUV0 252 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 RFLNBQ8N5W9 214 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 NUBPLQ8TB37 319 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 RASD2Q96D21 266 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 PGLYRP3Q96LB9 341 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 CNN2Q99439 309 aaKnown RBP13.74□□□□□ -0.21
PNKP-204ENST00000594661 RSRP1Q9BUV0 290 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 CHST5Q9GZS9 411 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 NRIP3Q9NQ35 241 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 EXPH5Q8NEV8 1989 aa13.74□□□□□ -0.21
PNKP-204ENST00000594661 TMEM72A0PK05 275 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 STMND1H3BQB6 276 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 FARS2O95363 451 aaKnown RBP13.73□□□□□ -0.21
PNKP-204ENST00000594661 ITPKBP27987 946 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 PYCR1P32322 319 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 SLC6A8P48029 635 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 SLC26A5P58743 744 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 DNM1P46Q6ZS02 220 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 NPEPL1Q8NDH3 523 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 OR6X1Q8NH79 312 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 SLC25A38Q96DW6 304 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 ULBP3Q9BZM4 244 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 ADAM19Q9H013 955 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 TMEM231Q9H6L2 316 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 GGT3PA6NGU5 568 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 ACOT7O00154 380 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 ARPC3O15145 178 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 RAB4AP20338 218 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 RAB5AP20339 215 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 CPT2P23786 658 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 ACVR1BP36896 505 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 AQP2P41181 271 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 PKIAP61925 76 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 ZNF74Q16587 644 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 NKPD1Q17RQ9 610 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 CDPF1Q6NVV7 123 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 DPPA2Q7Z7J5 298 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 ZNF671Q8TAW3 534 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 ZPLD1Q8TCW7 415 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 PAQR8Q8TEZ7 354 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 MR1Q95460 341 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 MISP3Q96FF7 219 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 LOXL4Q96JB6 756 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms