RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-242	ENST00000593093	ZNF729	A6NN14	1252 aa	Predicted RBP	12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	TSPAN15	O95858	294 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	RPS21	P63220	83 aa	Known RBP	12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	NPSR1	Q6W5P4	371 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	PPP1R3B	Q86XI6	285 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	CDC20B	Q86Y33	519 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	AVL9	Q8NBF6	648 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	TCTEX1D2	Q8WW35	142 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	IP6K3	Q96PC2	410 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	NUDT9	Q9BW91	350 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	CFHR5	Q9BXR6	569 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	SEC61A2	Q9H9S3	476 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	TAF9B	Q9HBM6	251 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	SPACA1	Q9HBV2	294 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	MMP25	Q9NPA2	562 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	HHLA2	Q9UM44	414 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	HEBP2	Q9Y5Z4	205 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093		A0A0A6YYH2	397 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093		A6NJ64	397 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	ZNF205	O95201	554 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	CA3	P07451	260 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	CEBPE	Q15744	281 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	TOMM34	Q15785	309 aa	Predicted RBP	12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	CA13	Q8N1Q1	262 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	POM121	Q96HA1	1249 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	G6PC3	Q9BUM1	346 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	KIR3DX1	Q9H7L2	352 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	IL23A	Q9NPF7	189 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	KCNK7	Q9Y2U2	307 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	FBXO7	Q9Y3I1	522 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	TXNDC12	O95881	172 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	LPAR6	P43657	344 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	RPS10	P46783	165 aa	Known RBP	12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	EMP2	P54851	167 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	RIPPLY1	Q0D2K3	151 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	ACKR1	Q16570	336 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	DHRS7B	Q6IAN0	325 aa	Predicted RBP	12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	FAM160A2	Q8N612	972 aa	Predicted RBP	12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	TMEM104	Q8NE00	496 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	OTOS	Q8NHW6	89 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	ASB5	Q8WWX0	329 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	ABHD6	Q9BV23	337 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	PTGES2	Q9H7Z7	377 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	WASF3	Q9UPY6	502 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	SPTBN5	Q9NRC6	3674 aa	Known RBP	12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	FAM186A	A6NE01	2351 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	LOC101059948	A0A1B0GTJ6	334 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	CYR61	O00622	381 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	ZNF354A	O60765	605 aa	Predicted RBP	12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	FBP1	P09467	338 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	ZBTB25	P24278	435 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	FMOD	Q06828	376 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	MEF2D	Q14814	521 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	RNF212	Q495C1	297 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	ANKRD9	Q96BM1	317 aa	Predicted RBP	12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	HDAC8	Q9BY41	377 aa		12.79	□□□□□ -0.36
CIRBP-242	ENST00000593093	IGKV1D-42	A0A075B6H8	117 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	CLDN4	O14493	209 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	MB	P02144	154 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	CTLA4	P16410	223 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	LAP3	P28838	519 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	ASCL1	P50553	236 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	HABP2	Q14520	560 aa	Predicted RBP	12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	WBP2NL	Q6ICG8	309 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	TMEM184A	Q6ZMB5	413 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	DCXR	Q7Z4W1	244 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	ANGPTL5	Q86XS5	388 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	PHYHIPL	Q96FC7	376 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	NUDT22	Q9BRQ3	303 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	MFRP	Q9BY79	579 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	NMNAT2	Q9BZQ4	307 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	MMP26	Q9NRE1	261 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	ZNF701	Q9NV72	531 aa	Predicted RBP	12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	CBY1	Q9Y3M2	126 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	ZNF878	C9JN71	531 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	ABHD16A	O95870	558 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	H2BFM	P0C1H6	154 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	AMY2B	P19961	511 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	LPCAT3	Q6P1A2	487 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	ZNF595	Q8IYB9	648 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	OR52N4	Q8NGI2	321 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	THAP3	Q8WTV1	239 aa	Predicted RBP	12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	SLAMF9	Q96A28	289 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	RNF166	Q96A37	237 aa	Predicted RBP	12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	C5orf34	Q96MH7	638 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	NECAB3	Q96P71	396 aa	Predicted RBP	12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	OR8B4	Q96RC9	309 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	NICN1	Q9BSH3	213 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	OR10A5	Q9H207	317 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	CNTD2	Q9H8S5	307 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	FAM60A	Q9NP50	221 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	SOHLH2	Q9NX45	425 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	LRP12	Q9Y561	859 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	MMP24	Q9Y5R2	645 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	MTCL1	Q9Y4B5	1905 aa	Known RBP	12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093		H0YIZ8	118 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	CD8A	P01732	235 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	HCK	P08631	526 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	OR8U9	P0C7N5	309 aa		12.78	□□□□□ -0.36
CIRBP-242	ENST00000593093	ZNF44	P15621	663 aa		12.78	□□□□□ -0.36

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