RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 ERI1Q8IV48 349 aaKnown RBP10.24□□□□□ -0.77
TPM4-212ENST00000590180 BHLHE23Q8NDY6 225 aa10.24□□□□□ -0.77
TPM4-212ENST00000590180 OR8G5Q8NG78 346 aa10.24□□□□□ -0.77
TPM4-212ENST00000590180 OR10S1Q8NGN2 331 aa10.24□□□□□ -0.77
TPM4-212ENST00000590180 ITLN1Q8WWA0 313 aa10.24□□□□□ -0.77
TPM4-212ENST00000590180 SLAMF6Q96DU3 332 aa10.24□□□□□ -0.77
TPM4-212ENST00000590180 NRBF2Q96F24 287 aa10.24□□□□□ -0.77
TPM4-212ENST00000590180 ZNF799Q96GE5 643 aa10.24□□□□□ -0.77
TPM4-212ENST00000590180 COPS4Q9BT78 406 aa10.24□□□□□ -0.77
TPM4-212ENST00000590180 MMADHCQ9H3L0 296 aaPredicted RBP10.24□□□□□ -0.77
TPM4-212ENST00000590180 NTN4Q9HB63 628 aa10.24□□□□□ -0.77
TPM4-212ENST00000590180 TMEM100Q9NV29 134 aa10.24□□□□□ -0.77
TPM4-212ENST00000590180 KIF17Q9P2E2 1029 aa10.24□□□□□ -0.77
TPM4-212ENST00000590180 TMEFF2Q9UIK5 374 aaPredicted RBP10.24□□□□□ -0.77
TPM4-212ENST00000590180 WIPI2Q9Y4P8 454 aa10.24□□□□□ -0.77
TPM4-212ENST00000590180 COMMD3-BMI1R4GMX3 469 aa10.24□□□□□ -0.77
TPM4-212ENST00000590180 CIB2O75838 187 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 GLCEO94923 617 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 SBK2P0C263 348 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 FAM157CP0CG43 387 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 ANPEPP15144 967 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 SRD5A1P18405 259 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 LMO4P61968 165 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 EIF2B1Q14232 305 aaKnown RBP10.23□□□□□ -0.77
TPM4-212ENST00000590180 GK2Q14410 553 aaPredicted RBP10.23□□□□□ -0.77
TPM4-212ENST00000590180 KLHL12Q53G59 568 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 TEX30Q5JUR7 227 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 LINC01590Q5TEZ4 76 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 TMEM236Q5W0B7 351 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 PGAP1Q75T13 922 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 CPOQ8IVL8 374 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 ZNF283Q8N7M2 679 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 OR6N2Q8NGY6 317 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 OR5K1Q8NHB7 308 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 SPRYD4Q8WW59 207 aaPredicted RBP10.23□□□□□ -0.77
TPM4-212ENST00000590180 C1orf159Q96HA4 380 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 INTS14Q96SY0 518 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 TMEM106BQ9NUM4 274 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 TVP23BQ9NYZ1 205 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 UBAP1Q9NZ09 502 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 IL19Q9UHD0 177 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 PPP1R3CQ9UQK1 317 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 AP4S1Q9Y587 144 aa10.23□□□□□ -0.77
TPM4-212ENST00000590180 WNK2Q9Y3S1 2297 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 IGHV3-64DA0A0J9YX35 117 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 IQCF6A8MYZ5 107 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 H0YL77 283 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 SLC2A1P11166 492 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 PSKH1P11801 424 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 PCMT1P22061 227 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 FASP25445 335 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 SRP14P37108 136 aaKnown RBP10.22□□□□□ -0.77
TPM4-212ENST00000590180 RBMXP38159 391 aaKnown RBP10.22□□□□□ -0.77
TPM4-212ENST00000590180 SLC15A1P46059 708 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 CRISP1P54107 249 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 DVL1P1P54792 670 aaPredicted RBP10.22□□□□□ -0.77
TPM4-212ENST00000590180 RPS7P62081 194 aaKnown RBP10.22□□□□□ -0.77
TPM4-212ENST00000590180 CDK5Q00535 292 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 HNRNPA0Q13151 305 aaKnown RBP10.22□□□□□ -0.77
TPM4-212ENST00000590180 SNAPC1Q16533 368 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 PCK2Q16822 640 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 DRAM2Q6UX65 266 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 SHFQ7M4L6 423 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 MRPL21Q7Z2W9 205 aaKnown RBP10.22□□□□□ -0.77
TPM4-212ENST00000590180 DPY19L4Q7Z388 723 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 AMIGO2Q86SJ2 522 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 GLCCI1Q86VQ1 547 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 OR10AD1Q8NGE0 317 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 OR51F2Q8NH61 342 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 UTP4Q969X6 686 aaKnown RBP10.22□□□□□ -0.77
TPM4-212ENST00000590180 TMEM186Q96B77 213 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 RAB39BQ96DA2 213 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 ZMYND19Q96E35 227 aaPredicted RBP10.22□□□□□ -0.77
TPM4-212ENST00000590180 OR2V2Q96R30 315 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 KCNJ15Q99712 375 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 GAL3ST1Q99999 423 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 ZNF665Q9H7R5 613 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 PAPOLBQ9NRJ5 636 aaKnown RBP10.22□□□□□ -0.77
TPM4-212ENST00000590180 DDX28Q9NUL7 540 aaKnown RBP10.22□□□□□ -0.77
TPM4-212ENST00000590180 HIF1ANQ9NWT6 349 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 DCAF16Q9NXF7 216 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 PCDHB10Q9UN67 800 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 NPTNQ9Y639 398 aa10.22□□□□□ -0.77
TPM4-212ENST00000590180 GGT3PA6NGU5 568 aa10.21□□□□□ -0.77
TPM4-212ENST00000590180 ZNF878C9JN71 531 aa10.21□□□□□ -0.77
TPM4-212ENST00000590180 F5H5P2 479 aa10.21□□□□□ -0.77
TPM4-212ENST00000590180 G3V2T6 193 aa10.21□□□□□ -0.77
TPM4-212ENST00000590180 TBX1O43435 398 aa10.21□□□□□ -0.77
TPM4-212ENST00000590180 HLA-DPB1P04440 258 aa10.21□□□□□ -0.77
TPM4-212ENST00000590180 MSMBP08118 114 aa10.21□□□□□ -0.77
TPM4-212ENST00000590180 HSD11B1P28845 292 aa10.21□□□□□ -0.77
TPM4-212ENST00000590180 SRP9P49458 86 aaKnown RBP10.21□□□□□ -0.77
TPM4-212ENST00000590180 DAPP51397 102 aa10.21□□□□□ -0.77
TPM4-212ENST00000590180 GRB2P62993 217 aaKnown RBP10.21□□□□□ -0.77
TPM4-212ENST00000590180 ZNF92Q03936 586 aa10.21□□□□□ -0.77
TPM4-212ENST00000590180 ATP6AP1Q15904 470 aa10.21□□□□□ -0.77
TPM4-212ENST00000590180 SNAI3Q3KNW1 292 aa10.21□□□□□ -0.77
TPM4-212ENST00000590180 FAHD2BQ6P2I3 314 aaPredicted RBP10.21□□□□□ -0.77
TPM4-212ENST00000590180 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.21□□□□□ -0.77
TPM4-212ENST00000590180 OR2AE1Q8NHA4 323 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms