RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 MAGEL2Q9UJ55 1249 aa15.02■□□□□ -0
PRKCSH-211ENST00000590098 TMCC3Q9ULS5 477 aa15.02■□□□□ -0
PRKCSH-211ENST00000590098 IGHV2-70DA0A0C4DH43 119 aa15.01□□□□□ -0.01
PRKCSH-211ENST00000590098 WIPF1O43516 503 aa15.01□□□□□ -0.01
PRKCSH-211ENST00000590098 IDH3BO43837 385 aa15.01□□□□□ -0.01
PRKCSH-211ENST00000590098 FSTL3O95633 263 aa15.01□□□□□ -0.01
PRKCSH-211ENST00000590098 PAX2Q02962 417 aa15.01□□□□□ -0.01
PRKCSH-211ENST00000590098 TRAP1Q12931 704 aaKnown RBP15.01□□□□□ -0.01
PRKCSH-211ENST00000590098 GK2Q14410 553 aaPredicted RBP15.01□□□□□ -0.01
PRKCSH-211ENST00000590098 KRTAP27-1Q3LI81 207 aa15.01□□□□□ -0.01
PRKCSH-211ENST00000590098 ZNF404Q494X3 552 aa15.01□□□□□ -0.01
PRKCSH-211ENST00000590098 SHISA2Q6UWI4 295 aa15.01□□□□□ -0.01
PRKCSH-211ENST00000590098 PGAP1Q75T13 922 aa15.01□□□□□ -0.01
PRKCSH-211ENST00000590098 ZBTB46Q86UZ6 589 aa15.01□□□□□ -0.01
PRKCSH-211ENST00000590098 SDR9C7Q8NEX9 313 aa15.01□□□□□ -0.01
PRKCSH-211ENST00000590098 OR11L1Q8NGX0 322 aa15.01□□□□□ -0.01
PRKCSH-211ENST00000590098 SPRYD4Q8WW59 207 aaPredicted RBP15.01□□□□□ -0.01
PRKCSH-211ENST00000590098 RAB40AQ8WXH6 277 aa15.01□□□□□ -0.01
PRKCSH-211ENST00000590098 ZNF48Q96MX3 618 aaPredicted RBP15.01□□□□□ -0.01
PRKCSH-211ENST00000590098 CYB5R1Q9UHQ9 305 aa15.01□□□□□ -0.01
PRKCSH-211ENST00000590098 IGHV3OR16-10A0A075B7F0 116 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 A0A1B0GWJ7 208 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 OR6C68A6NDL8 312 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 FABP3P05413 133 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 IGHV4-38-2P0DP08 117 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 ZNF823P16415 610 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 GATA4P43694 442 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 PITPNBP48739 271 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 TPTEP56180 551 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 FAM201AQ5SY85 155 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 MRPL21Q7Z2W9 205 aaKnown RBP15□□□□□ -0.01
PRKCSH-211ENST00000590098 NAA40Q86UY6 237 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 CELF2-AS1Q8N7Q2 184 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 GNPDA2Q8TDQ7 276 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 SPTSSAQ969W0 71 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 ERGIC1Q969X5 290 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 SLCO4A1Q96BD0 722 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 UPRTQ96BW1 309 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 NSMCE2Q96MF7 247 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 NSRP1Q9H0G5 558 aaKnown RBP15□□□□□ -0.01
PRKCSH-211ENST00000590098 FN3KQ9H479 309 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 CLN8Q9UBY8 286 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 KCNG2Q9UJ96 466 aa15□□□□□ -0.01
PRKCSH-211ENST00000590098 NOP16Q9Y3C1 178 aaKnown RBP15□□□□□ -0.01
PRKCSH-211ENST00000590098 KIR2DS1A0A191URI9 304 aa14.99□□□□□ -0.01
PRKCSH-211ENST00000590098 SEMG1P04279 462 aa14.99□□□□□ -0.01
PRKCSH-211ENST00000590098 RNASE1P07998 156 aaKnown RBP14.99□□□□□ -0.01
PRKCSH-211ENST00000590098 RRM2P31350 389 aa14.99□□□□□ -0.01
PRKCSH-211ENST00000590098 GGT2P36268 569 aa14.99□□□□□ -0.01
PRKCSH-211ENST00000590098 PMELP40967 661 aa14.99□□□□□ -0.01
PRKCSH-211ENST00000590098 GSSP48637 474 aa14.99□□□□□ -0.01
PRKCSH-211ENST00000590098 RAD23AP54725 363 aa14.99□□□□□ -0.01
PRKCSH-211ENST00000590098 PRSS12P56730 875 aa14.99□□□□□ -0.01
PRKCSH-211ENST00000590098 DBPQ10586 325 aaPredicted RBP14.99□□□□□ -0.01
PRKCSH-211ENST00000590098 TSPAN31Q12999 210 aa14.99□□□□□ -0.01
PRKCSH-211ENST00000590098 SAMD4BQ5PRF9 694 aaKnown RBP14.99□□□□□ -0.01
PRKCSH-211ENST00000590098 SLC35F1Q5T1Q4 408 aa14.99□□□□□ -0.01
PRKCSH-211ENST00000590098 DCDC5Q6ZRR9 648 aa14.99□□□□□ -0.01
PRKCSH-211ENST00000590098 C9orf139Q6ZV77 190 aa14.99□□□□□ -0.01
PRKCSH-211ENST00000590098 C1orf147Q96MC9 270 aaPredicted RBP14.99□□□□□ -0.01
PRKCSH-211ENST00000590098 NUDT16L1Q9BRJ7 211 aaKnown RBP14.99□□□□□ -0.01
PRKCSH-211ENST00000590098 FAM107BQ9H098 131 aa14.99□□□□□ -0.01
PRKCSH-211ENST00000590098 CLDN34H7C241 214 aa14.98□□□□□ -0.01
PRKCSH-211ENST00000590098 M0R135 149 aa14.98□□□□□ -0.01
PRKCSH-211ENST00000590098 HSD17B1P14061 328 aa14.98□□□□□ -0.01
PRKCSH-211ENST00000590098 MSX2P35548 267 aaPredicted RBP14.98□□□□□ -0.01
PRKCSH-211ENST00000590098 CD200P41217 278 aa14.98□□□□□ -0.01
PRKCSH-211ENST00000590098 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.98□□□□□ -0.01
PRKCSH-211ENST00000590098 MAB21L1Q13394 359 aa14.98□□□□□ -0.01
PRKCSH-211ENST00000590098 SLC9A3R2Q15599 337 aa14.98□□□□□ -0.01
PRKCSH-211ENST00000590098 OR8G1Q15617 311 aa14.98□□□□□ -0.01
PRKCSH-211ENST00000590098 ZNF620Q6ZNG0 422 aa14.98□□□□□ -0.01
PRKCSH-211ENST00000590098 PROKR2Q8NFJ6 384 aa14.98□□□□□ -0.01
PRKCSH-211ENST00000590098 OR52L1Q8NGH7 329 aa14.98□□□□□ -0.01
PRKCSH-211ENST00000590098 Q8TCH9 128 aa14.98□□□□□ -0.01
PRKCSH-211ENST00000590098 ZNF799Q96GE5 643 aa14.98□□□□□ -0.01
PRKCSH-211ENST00000590098 SLC22A4Q9H015 551 aa14.98□□□□□ -0.01
PRKCSH-211ENST00000590098 IL1RAPQ9NPH3 570 aa14.98□□□□□ -0.01
PRKCSH-211ENST00000590098 PNRC2Q9NPJ4 139 aaKnown RBP14.98□□□□□ -0.01
PRKCSH-211ENST00000590098 UFSP2Q9NUQ7 469 aa14.98□□□□□ -0.01
PRKCSH-211ENST00000590098 TRRAPQ9Y4A5 3859 aa14.98□□□□□ -0.01
PRKCSH-211ENST00000590098 TRAV40A0A0B4J280 105 aa14.97□□□□□ -0.01
PRKCSH-211ENST00000590098 PHYHO14832 338 aa14.97□□□□□ -0.01
PRKCSH-211ENST00000590098 TMPRSS2O15393 492 aa14.97□□□□□ -0.01
PRKCSH-211ENST00000590098 FAM20BO75063 409 aa14.97□□□□□ -0.01
PRKCSH-211ENST00000590098 PLATP00750 562 aa14.97□□□□□ -0.01
PRKCSH-211ENST00000590098 CA6P23280 308 aa14.97□□□□□ -0.01
PRKCSH-211ENST00000590098 IL13RA1P78552 427 aa14.97□□□□□ -0.01
PRKCSH-211ENST00000590098 KCNJ8Q15842 424 aa14.97□□□□□ -0.01
PRKCSH-211ENST00000590098 CLEC12AQ5QGZ9 265 aa14.97□□□□□ -0.01
PRKCSH-211ENST00000590098 PRAMEF6Q5VXH4 476 aa14.97□□□□□ -0.01
PRKCSH-211ENST00000590098 WDR25Q64LD2 544 aaPredicted RBP14.97□□□□□ -0.01
PRKCSH-211ENST00000590098 RPL13AP3Q6NVV1 102 aa14.97□□□□□ -0.01
PRKCSH-211ENST00000590098 ZDHHC21Q8IVQ6 265 aa14.97□□□□□ -0.01
PRKCSH-211ENST00000590098 PGAM4Q8N0Y7 254 aa14.97□□□□□ -0.01
PRKCSH-211ENST00000590098 MAP6Q96JE9 813 aa14.97□□□□□ -0.01
PRKCSH-211ENST00000590098 UNKLQ9H9P5 680 aaKnown RBP14.97□□□□□ -0.01
PRKCSH-211ENST00000590098 FN3KRPQ9HA64 309 aa14.97□□□□□ -0.01
PRKCSH-211ENST00000590098 MRPL22Q9NWU5 206 aaKnown RBP14.97□□□□□ -0.01
PRKCSH-211ENST00000590098 SOX21Q9Y651 276 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms