RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 RTN4RL2Q86UN3 420 aa11.92□□□□□ -0.5
KDM4B-208ENST00000589104 PUSL1Q8N0Z8 303 aaKnown RBP11.92□□□□□ -0.5
KDM4B-208ENST00000589104 RRNAD1Q96FB5 475 aaKnown RBP11.92□□□□□ -0.5
KDM4B-208ENST00000589104 POTEKPQ9BYX7 375 aa11.92□□□□□ -0.5
KDM4B-208ENST00000589104 CST11Q9H112 138 aa11.92□□□□□ -0.5
KDM4B-208ENST00000589104 PIGMQ9H3S5 423 aa11.92□□□□□ -0.5
KDM4B-208ENST00000589104 EYSQ5T1H1 3165 aa11.92□□□□□ -0.5
KDM4B-208ENST00000589104 MEGF11A6BM72 1044 aa11.92□□□□□ -0.5
KDM4B-208ENST00000589104 ZNF208O43345 1280 aa11.92□□□□□ -0.5
KDM4B-208ENST00000589104 CA11O75493 328 aa11.92□□□□□ -0.5
KDM4B-208ENST00000589104 GTF2F2P13984 249 aa11.92□□□□□ -0.5
KDM4B-208ENST00000589104 CSNK1EP49674 416 aaKnown RBP11.92□□□□□ -0.5
KDM4B-208ENST00000589104 HIST1H3AP68431 136 aa11.92□□□□□ -0.5
KDM4B-208ENST00000589104 FOXK1P85037 733 aa11.92□□□□□ -0.5
KDM4B-208ENST00000589104 ACER2Q5QJU3 275 aa11.92□□□□□ -0.5
KDM4B-208ENST00000589104 HIST2H3PS2Q5TEC6 136 aa11.92□□□□□ -0.5
KDM4B-208ENST00000589104 ARHGAP40Q5TG30 622 aa11.92□□□□□ -0.5
KDM4B-208ENST00000589104 PAPD4Q6PIY7 484 aaKnown RBP11.92□□□□□ -0.5
KDM4B-208ENST00000589104 HIST2H3AQ71DI3 136 aa11.92□□□□□ -0.5
KDM4B-208ENST00000589104 SSX9Q7RTT3 188 aa11.92□□□□□ -0.5
KDM4B-208ENST00000589104 MDGA2Q7Z553 956 aa11.92□□□□□ -0.5
KDM4B-208ENST00000589104 UPB1Q9UBR1 384 aa11.92□□□□□ -0.5
KDM4B-208ENST00000589104 RAB22AQ9UL26 194 aa11.92□□□□□ -0.5
KDM4B-208ENST00000589104 MYO15AQ9UKN7 3530 aa11.92□□□□□ -0.5
KDM4B-208ENST00000589104 UBE2QL1A1L167 161 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 RPP14O95059 124 aaKnown RBP11.91□□□□□ -0.5
KDM4B-208ENST00000589104 CRHP06850 196 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 VSIG8P0DPA2 414 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 S100PP25815 95 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 RPS27P42677 84 aaKnown RBP11.91□□□□□ -0.5
KDM4B-208ENST00000589104 SOX2P48431 317 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 HHEXQ03014 270 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 PPP1R1AQ13522 171 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 SNTB1Q13884 538 aaKnown RBP11.91□□□□□ -0.5
KDM4B-208ENST00000589104 FBXO46Q6PJ61 603 aaPredicted RBP11.91□□□□□ -0.5
KDM4B-208ENST00000589104 COX15Q7KZN9 410 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 NDUFAF7Q7L592 441 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 SLC16A14Q7RTX9 510 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 CNTRLQ7Z7A1 2325 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 LDLRAD3Q86YD5 345 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 DVL3Q92997 716 aaPredicted RBP11.91□□□□□ -0.5
KDM4B-208ENST00000589104 WWTR1Q9GZV5 400 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 CNTD2Q9H8S5 307 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 CUTCQ9NTM9 273 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 GON4LQ3T8J9 2241 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 LOC102725191A0A1B0GVB3 256 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 ZNF121P58317 390 aaPredicted RBP11.91□□□□□ -0.5
KDM4B-208ENST00000589104 CFHR1Q03591 330 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 TSC22D1Q15714 1073 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 ELAVL1Q15717 326 aaKnown RBP11.91□□□□□ -0.5
KDM4B-208ENST00000589104 AADACL3Q5VUY0 350 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 OR6N2Q8NGY6 317 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 DUSP19Q8WTR2 217 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 RTBDNQ9BSG5 229 aaPredicted RBP11.91□□□□□ -0.5
KDM4B-208ENST00000589104 GPR132Q9UNW8 380 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 OSGIN2Q9Y236 505 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 TMEM218A2RU14 115 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 A8MVM7 634 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 C17orf105B2RV13 164 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 ACTL6AO96019 429 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 MAS1LP35410 378 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 ATP1B3P54709 279 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 CLDN6P56747 220 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 DEFB110Q30KQ9 67 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 GLYATL2Q8WU03 294 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 SRA1Q9HD15 236 aaKnown RBP11.91□□□□□ -0.5
KDM4B-208ENST00000589104 SRPK3Q9UPE1 567 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 FLVCR1Q9Y5Y0 555 aa11.91□□□□□ -0.5
KDM4B-208ENST00000589104 IGHV5-51A0A0C4DH38 117 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 MFNGO00587 321 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 SMAD9O15198 467 aaKnown RBP11.9□□□□□ -0.5
KDM4B-208ENST00000589104 SLC25A12O75746 678 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 RFC3P40938 356 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 STARP49675 285 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 NKPD1Q17RQ9 610 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 PLAC9Q5JTB6 97 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 GLYATL3Q5SZD4 288 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 GRINAQ7Z429 371 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 ZNF75AQ96N20 296 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 YPEL4Q96NS1 127 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 LPAR5Q9H1C0 372 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 MRPS33Q9Y291 106 aaKnown RBP11.9□□□□□ -0.5
KDM4B-208ENST00000589104 TMED7Q9Y3B3 224 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 EFNA2O43921 213 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 RAB3DO95716 219 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 CD5P06127 495 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 IL11P20809 199 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 SUMO3P55854 103 aaPredicted RBP11.9□□□□□ -0.5
KDM4B-208ENST00000589104 SPEM2Q0P670 501 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 ERV3-1Q14264 604 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 AVPI1Q5T686 147 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 RAB12Q6IQ22 244 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 KDF1Q8NAX2 398 aaPredicted RBP11.9□□□□□ -0.5
KDM4B-208ENST00000589104 OR1N1Q8NGS0 311 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 MFSD8Q8NHS3 518 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 C11orf1Q9H5F2 150 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 GAREM1Q9H706 876 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 FBXO4Q9UKT5 387 aa11.9□□□□□ -0.5
KDM4B-208ENST00000589104 LOC107986453A0A1B0GWG9 222 aa11.9□□□□□ -0.51
KDM4B-208ENST00000589104 HLA-DOBP13765 273 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms