RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 CELSR2Q9HCU4 2923 aa12.54□□□□□ -0.4
CNN1-208ENST00000588935 TMEM269A0A1B0GVZ9 245 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 TMEM129A0AVI4 362 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 J3QRE1 110 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 CD8AP01732 235 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 DANCRP0C864 163 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 OTX1P32242 354 aaPredicted RBP12.53□□□□□ -0.4
CNN1-208ENST00000588935 CDKN1AP38936 164 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 RGS6P49758 472 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 OR12D2P58182 307 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 ACTC1P68032 377 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 ACTA1P68133 377 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 ROM1Q03395 351 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 ST3GAL4Q11206 333 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 MST1LQ2TV78 715 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 GLYATL3Q5SZD4 288 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 C20orf204Q6ZNR8 217 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 ZNF786Q8N393 782 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 STX19Q8N4C7 294 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 KLF14Q8TD94 323 aaPredicted RBP12.53□□□□□ -0.4
CNN1-208ENST00000588935 SGCDQ92629 289 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 MARS2Q96GW9 593 aaKnown RBP12.53□□□□□ -0.4
CNN1-208ENST00000588935 TMEM80Q96HE8 168 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 DOK1Q99704 481 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 ALG8Q9BVK2 526 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 C1QTNF5Q9BXJ0 243 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 ZNF442Q9H7R0 627 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 FGF20Q9NP95 211 aaPredicted RBP12.53□□□□□ -0.4
CNN1-208ENST00000588935 CBLN4Q9NTU7 201 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 FAIMQ9NVQ4 179 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 MRPS18AQ9NVS2 196 aaKnown RBP12.53□□□□□ -0.4
CNN1-208ENST00000588935 ERVK13-1Q9NX77 482 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 SCN3BQ9NY72 215 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 TAAR3PQ9P1P4 343 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 ZNF319Q9P2F9 582 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 PSORS1C1Q9UIG5 152 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 UNC79Q9P2D8 2635 aa12.53□□□□□ -0.4
CNN1-208ENST00000588935 DCHS2Q6V1P9 2916 aa12.52□□□□□ -0.4
CNN1-208ENST00000588935 ARID1AO14497 2285 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 EFCAB10A6NFE3 127 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 CYSRT1A8MQ03 144 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 SLC1A7O00341 560 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 ZNF254O75437 659 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 PNPP00491 289 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 APOC1P02654 83 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 RAF1P04049 648 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 ALDH3B1P43353 468 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 ETV1P50549 477 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 KLF3P57682 345 aaPredicted RBP12.52□□□□□ -0.41
CNN1-208ENST00000588935 SELENOVP59797 346 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 EGR3Q06889 387 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 MFGE8Q08431 387 aaPredicted RBP12.52□□□□□ -0.41
CNN1-208ENST00000588935 MALLQ13021 153 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 ODF4Q2M2E3 257 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 LIPNQ5VXI9 398 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 OR2T2Q6IF00 324 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 DEGS2Q6QHC5 323 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 PAMR1Q6UXH9 720 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 COLCA1Q6ZS62 124 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 RHOUQ7L0Q8 258 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 FAM220AQ7Z4H9 259 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 OR5AS1Q8N127 324 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 ZCCHC24Q8N2G6 241 aaKnown RBP12.52□□□□□ -0.41
CNN1-208ENST00000588935 IPCEF1Q8WWN9 437 aaPredicted RBP12.52□□□□□ -0.41
CNN1-208ENST00000588935 SGK3Q96BR1 496 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 SIGLEC11Q96RL6 698 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 VRK1Q99986 396 aaPredicted RBP12.52□□□□□ -0.41
CNN1-208ENST00000588935 TRAF4Q9BUZ4 470 aaPredicted RBP12.52□□□□□ -0.41
CNN1-208ENST00000588935 ISG20L2Q9H9L3 353 aaKnown RBP12.52□□□□□ -0.41
CNN1-208ENST00000588935 PLCXD1Q9NUJ7 323 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 CHCHD3Q9NX63 227 aaKnown RBP12.52□□□□□ -0.41
CNN1-208ENST00000588935 UBAP1Q9NZ09 502 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 CLEC2DQ9UHP7 191 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 ST6GALNAC2Q9UJ37 374 aa12.52□□□□□ -0.41
CNN1-208ENST00000588935 IRGMA1A4Y4 181 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 B9A039 149 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 LOC110117498-PIK3R3F6TDL0 507 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 H3BSH0 61 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 DENRO43583 198 aaKnown RBP12.51□□□□□ -0.41
CNN1-208ENST00000588935 TIMM8AO60220 97 aaPredicted RBP12.51□□□□□ -0.41
CNN1-208ENST00000588935 IGHA1P01876 353 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 CD53P19397 219 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 DNASE1P24855 282 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 C21orf33P30042 268 aaPredicted RBP12.51□□□□□ -0.41
CNN1-208ENST00000588935 PSMA6P60900 246 aaKnown RBP12.51□□□□□ -0.41
CNN1-208ENST00000588935 ZNF92Q03936 586 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 PSG7Q13046 419 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 GALEQ14376 348 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 TIGD6Q17RP2 521 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 NKPD1Q17RQ9 610 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 ZNF829Q3KNS6 432 aaPredicted RBP12.51□□□□□ -0.41
CNN1-208ENST00000588935 TMEM255AQ5JRV8 349 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 OR2G6Q5TZ20 316 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 MRPL21Q7Z2W9 205 aaKnown RBP12.51□□□□□ -0.41
CNN1-208ENST00000588935 GTF3AQ92664 365 aaKnown RBP12.51□□□□□ -0.41
CNN1-208ENST00000588935 C4orf36Q96KX1 117 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 CACNG6Q9BXT2 260 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 OR10A2Q9H208 303 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 NIPAL2Q9H841 368 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 DYNLRB1Q9NP97 96 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms