RNA–Protein interactions for RNA: ENST00000588062.5

TRAPPC6A-204, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2 BASIC

Gene TRAPPC6A, Length 695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-204ENST00000588062 IGHV2-70DA0A0C4DH43 119 aa12.97□□□□□ -0.33
TRAPPC6A-204ENST00000588062 IDH3BO43837 385 aa12.97□□□□□ -0.33
TRAPPC6A-204ENST00000588062 OR10H3O60404 316 aa12.97□□□□□ -0.33
TRAPPC6A-204ENST00000588062 GMNNO75496 209 aa12.97□□□□□ -0.33
TRAPPC6A-204ENST00000588062 TRAP1Q12931 704 aaKnown RBP12.97□□□□□ -0.33
TRAPPC6A-204ENST00000588062 FOXL1Q12952 345 aa12.97□□□□□ -0.33
TRAPPC6A-204ENST00000588062 SLC36A3Q495N2 470 aa12.97□□□□□ -0.33
TRAPPC6A-204ENST00000588062 LRRN1Q6UXK5 716 aa12.97□□□□□ -0.33
TRAPPC6A-204ENST00000588062 ZNF620Q6ZNG0 422 aa12.97□□□□□ -0.33
TRAPPC6A-204ENST00000588062 C9orf139Q6ZV77 190 aa12.97□□□□□ -0.33
TRAPPC6A-204ENST00000588062 SDR9C7Q8NEX9 313 aa12.97□□□□□ -0.33
TRAPPC6A-204ENST00000588062 OR52E2Q8NGJ4 325 aa12.97□□□□□ -0.33
TRAPPC6A-204ENST00000588062 OR10S1Q8NGN2 331 aa12.97□□□□□ -0.33
TRAPPC6A-204ENST00000588062 Q8TCH9 128 aa12.97□□□□□ -0.33
TRAPPC6A-204ENST00000588062 RAB40AQ8WXH6 277 aa12.97□□□□□ -0.33
TRAPPC6A-204ENST00000588062 NEIL1Q96FI4 390 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC6A-204ENST00000588062 MAP6Q96JE9 813 aa12.97□□□□□ -0.33
TRAPPC6A-204ENST00000588062 ATF6BQ99941 703 aa12.97□□□□□ -0.33
TRAPPC6A-204ENST00000588062 MAGEL2Q9UJ55 1249 aa12.97□□□□□ -0.33
TRAPPC6A-204ENST00000588062 TRRAPQ9Y4A5 3859 aa12.97□□□□□ -0.33
TRAPPC6A-204ENST00000588062 KIR2DS1A0A191URI9 304 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 SNX3O60493 162 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 PLATP00750 562 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 LCATP04180 440 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 ANOS1P23352 680 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 RRM2P31350 389 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 CD200P41217 278 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 RAD23AP54725 363 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 GNB2P62879 340 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 TSPAN31Q12999 210 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 BAMBIQ13145 260 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 CLEC12AQ5QGZ9 265 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 ZNF362Q5T0B9 420 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 SLC35F1Q5T1Q4 408 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 PGBD2Q6P3X8 592 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 LYPD2Q6UXB3 125 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 ZNF841Q6ZN19 808 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 C1orf87Q8N0U7 546 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 PARP8Q8N3A8 854 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 CELF2-AS1Q8N7Q2 184 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 OR2AJ1Q8NGZ0 328 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 ZNRF4Q8WWF5 429 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 SLCO4A1Q96BD0 722 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 MS4A7Q9GZW8 240 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 ZMAT3Q9HA38 289 aaKnown RBP12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 IL1RAPQ9NPH3 570 aa12.96□□□□□ -0.33
TRAPPC6A-204ENST00000588062 IGHV3OR16-10A0A075B7F0 116 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 LRRC30A6NM36 301 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 CLDN34H7C241 214 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 ARPC2O15144 300 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 TMPRSS2O15393 492 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 FABP3P05413 133 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 RNASE1P07998 156 aaKnown RBP12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 NOS3P29474 1203 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 RPS27P42677 84 aaKnown RBP12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 HMGA2P52926 109 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 SLC9A3R2Q15599 337 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 MPPED2Q15777 294 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 SAMD4BQ5PRF9 694 aaKnown RBP12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 BTNL3Q6UXE8 466 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 PGAP1Q75T13 922 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 PGAM4Q8N0Y7 254 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 GNPDA2Q8TDQ7 276 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 ERGIC1Q969X5 290 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 PLEKHA8Q96JA3 519 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 NSMCE2Q96MF7 247 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 CDRT15Q96T59 188 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 CDADC1Q9BWV3 514 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 EGLN3Q9H6Z9 239 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 KCNG2Q9UJ96 466 aa12.95□□□□□ -0.34
TRAPPC6A-204ENST00000588062 C5orf63A6NC05 138 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 M0R135 149 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 BHLHE40O14503 412 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 WIPF1O43516 503 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 FAM20BO75063 409 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 PTBP3O95758 552 aaKnown RBP12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 HLA-DQA2P01906 255 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 PSKH1P11801 424 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 OTX1P32242 354 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 PYCR1P32322 319 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 IFNGR2P38484 337 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 PSMB10P40306 273 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 PITPNBP48739 271 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 TPTEP56180 551 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 HOXA4Q00056 320 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 MALLQ13021 153 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 PRAMEF6Q5VXH4 476 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 WDR25Q64LD2 544 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 SHISA2Q6UWI4 295 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 FITM2Q8N6M3 262 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 CYB561A3Q8NBI2 242 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 C19orf18Q8NEA5 215 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 OR8B3Q8NGG8 313 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 MCUR1Q96AQ8 359 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 ZNF799Q96GE5 643 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 OR8B2Q96RD0 313 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 NUDT16L1Q9BRJ7 211 aaKnown RBP12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 FAM107BQ9H098 131 aa12.94□□□□□ -0.34
TRAPPC6A-204ENST00000588062 UFSP2Q9NUQ7 469 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms