RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 SLC36A3Q495N2 470 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 LYPD4Q6UWN0 246 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 KLBQ86Z14 1044 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 ZDHHC21Q8IVQ6 265 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 MUC20Q8N307 709 aaPredicted RBP12.01□□□□□ -0.49
VMP1-206ENST00000587945 C19orf18Q8NEA5 215 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 OR9Q2Q8NGE9 314 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 ZNRF4Q8WWF5 429 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 SLCO4A1Q96BD0 722 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 MAP6Q96JE9 813 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 ZNF48Q96MX3 618 aaPredicted RBP12.01□□□□□ -0.49
VMP1-206ENST00000587945 ATF6BQ99941 703 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 TMEM246Q9BRR3 403 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 MRI1Q9BV20 369 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 SSBP3Q9BWW4 388 aaPredicted RBP12.01□□□□□ -0.49
VMP1-206ENST00000587945 NTN4Q9HB63 628 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 TAGLN3Q9UI15 199 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 C5orf63A6NC05 138 aa12□□□□□ -0.49
VMP1-206ENST00000587945 TVP23AA6NH52 213 aa12□□□□□ -0.49
VMP1-206ENST00000587945 IDH3BO43837 385 aa12□□□□□ -0.49
VMP1-206ENST00000587945 PSKH1P11801 424 aa12□□□□□ -0.49
VMP1-206ENST00000587945 PAX2Q02962 417 aa12□□□□□ -0.49
VMP1-206ENST00000587945 ECH1Q13011 328 aa12□□□□□ -0.49
VMP1-206ENST00000587945 MAB21L1Q13394 359 aa12□□□□□ -0.49
VMP1-206ENST00000587945 TUSC1Q2TAM9 212 aa12□□□□□ -0.49
VMP1-206ENST00000587945 AWAT1Q58HT5 328 aa12□□□□□ -0.49
VMP1-206ENST00000587945 PRAMEF6Q5VXH4 476 aa12□□□□□ -0.49
VMP1-206ENST00000587945 CYP2R1Q6VVX0 501 aa12□□□□□ -0.49
VMP1-206ENST00000587945 RBMS3Q6XE24 437 aaKnown RBP12□□□□□ -0.49
VMP1-206ENST00000587945 DOK3Q7L591 496 aa12□□□□□ -0.49
VMP1-206ENST00000587945 DEFB107AQ8IZN7 70 aa12□□□□□ -0.49
VMP1-206ENST00000587945 OR51L1Q8NGJ5 315 aa12□□□□□ -0.49
VMP1-206ENST00000587945 OR10S1Q8NGN2 331 aa12□□□□□ -0.49
VMP1-206ENST00000587945 DDOQ99489 341 aa12□□□□□ -0.49
VMP1-206ENST00000587945 BTBD10Q9BSF8 475 aa12□□□□□ -0.49
VMP1-206ENST00000587945 LRCH1Q9Y2L9 728 aa12□□□□□ -0.49
VMP1-206ENST00000587945 A0A1B0GWJ7 208 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 LRRC30A6NM36 301 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 M0R135 149 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 TNFRSF11BO00300 401 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 BHLHE40O14503 412 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 IGHV4-38-2P0DP08 117 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 ZNF823P16415 610 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 EGR1P18146 543 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 TPTEP56180 551 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 GNB2P62879 340 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 PPP1R8Q12972 351 aaKnown RBP11.99□□□□□ -0.49
VMP1-206ENST00000587945 MALLQ13021 153 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 MPPED2Q15777 294 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 ZNF181Q2M3W8 571 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 SNAI3Q3KNW1 292 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 ZNF404Q494X3 552 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 LYPD2Q6UXB3 125 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 PGAP1Q75T13 922 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 PROKR2Q8NFJ6 384 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 OR8D4Q8NGM9 314 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 SPRYD4Q8WW59 207 aaPredicted RBP11.99□□□□□ -0.49
VMP1-206ENST00000587945 ZNF799Q96GE5 643 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 C1orf147Q96MC9 270 aaPredicted RBP11.99□□□□□ -0.49
VMP1-206ENST00000587945 UFSP2Q9NUQ7 469 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 MIOXQ9UGB7 285 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 LYVE1Q9Y5Y7 322 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 CDH10Q9Y6N8 788 aa11.99□□□□□ -0.49
VMP1-206ENST00000587945 DYSFO75923 2080 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 IGHV2-70DA0A0C4DH43 119 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 DNAJC9-AS1A6NH13 148 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 ATP8B1O43520 1251 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 FAM20BO75063 409 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 GASTP01350 101 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 ATP6V1B2P21281 511 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 CA6P23280 308 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 PRTN3P24158 256 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 HMGA2P52926 109 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 GNGT1P63211 74 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 MXRA7P84157 204 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 ZNF92Q03936 586 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 BAMBIQ13145 260 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 ZNF362Q5T0B9 420 aaPredicted RBP11.98□□□□□ -0.49
VMP1-206ENST00000587945 C16orf89Q6UX73 402 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 BTNL3Q6UXE8 466 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 MRPL21Q7Z2W9 205 aaKnown RBP11.98□□□□□ -0.49
VMP1-206ENST00000587945 OR8B3Q8NGG8 313 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 OR52L1Q8NGH7 329 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 OR4C15Q8NGM1 316 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 OR9Q1Q8NGQ5 310 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 OR2AE1Q8NHA4 323 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 RAB40AQ8WXH6 277 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 NEIL1Q96FI4 390 aaPredicted RBP11.98□□□□□ -0.49
VMP1-206ENST00000587945 OR8B2Q96RD0 313 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 MS4A7Q9GZW8 240 aaPredicted RBP11.98□□□□□ -0.49
VMP1-206ENST00000587945 ARL2BPQ9Y2Y0 163 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 PCDHGB1Q9Y5G3 927 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 TANC2Q9HCD6 1990 aa11.98□□□□□ -0.49
VMP1-206ENST00000587945 CD300LBA8K4G0 201 aa11.97□□□□□ -0.49
VMP1-206ENST00000587945 KRT36O76013 467 aa11.97□□□□□ -0.49
VMP1-206ENST00000587945 HKR1P10072 659 aa11.97□□□□□ -0.49
VMP1-206ENST00000587945 IRF2P14316 349 aa11.97□□□□□ -0.49
VMP1-206ENST00000587945 CD200P41217 278 aa11.97□□□□□ -0.49
VMP1-206ENST00000587945 GATA4P43694 442 aa11.97□□□□□ -0.49
VMP1-206ENST00000587945 PITPNBP48739 271 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms