RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 COLCA1Q6ZS62 124 aa12.59□□□□□ -0.39
ATG4D-207ENST00000587256 MRPL21Q7Z2W9 205 aaKnown RBP12.59□□□□□ -0.39
ATG4D-207ENST00000587256 DPY19L4Q7Z388 723 aa12.59□□□□□ -0.39
ATG4D-207ENST00000587256 CPOQ8IVL8 374 aa12.59□□□□□ -0.39
ATG4D-207ENST00000587256 BHLHE23Q8NDY6 225 aa12.59□□□□□ -0.39
ATG4D-207ENST00000587256 ST7LQ8TDW4 575 aa12.59□□□□□ -0.39
ATG4D-207ENST00000587256 PYDC1Q8WXC3 89 aa12.59□□□□□ -0.39
ATG4D-207ENST00000587256 HPS1Q92902 700 aa12.59□□□□□ -0.39
ATG4D-207ENST00000587256 TIMD4Q96H15 378 aa12.59□□□□□ -0.39
ATG4D-207ENST00000587256 ZNF582Q96NG8 517 aaPredicted RBP12.59□□□□□ -0.39
ATG4D-207ENST00000587256 TVP23BQ9NYZ1 205 aa12.59□□□□□ -0.39
ATG4D-207ENST00000587256 ENOPH1Q9UHY7 261 aa12.59□□□□□ -0.39
ATG4D-207ENST00000587256 CACNG2Q9Y698 323 aa12.59□□□□□ -0.39
ATG4D-207ENST00000587256 SAC3D1A6NKF1 404 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 SELENOFO60613 162 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 CD55P08174 381 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 SELEP16581 610 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 TNFRSF1AP19438 455 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 IGFBP5P24593 272 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 IL2RGP31785 369 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 OTX1P32242 354 aaPredicted RBP12.58□□□□□ -0.4
ATG4D-207ENST00000587256 NAA10P41227 235 aaPredicted RBP12.58□□□□□ -0.4
ATG4D-207ENST00000587256 SLC15A1P46059 708 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 PRSS12P56730 875 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 ACTR3P61158 418 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 GRB2P62993 217 aaKnown RBP12.58□□□□□ -0.4
ATG4D-207ENST00000587256 MVKQ03426 396 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 CDK5R2Q13319 367 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 GK2Q14410 553 aaPredicted RBP12.58□□□□□ -0.4
ATG4D-207ENST00000587256 PTGES3Q15185 160 aaKnown RBP12.58□□□□□ -0.4
ATG4D-207ENST00000587256 DRAM2Q6UX65 266 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 Q6ZR03 302 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 PGAP1Q75T13 922 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 SHFQ7M4L6 423 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 NAA40Q86UY6 237 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 ZNF283Q8N7M2 679 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 BBS1Q8NFJ9 593 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 OR8G5Q8NG78 346 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 OR10AD1Q8NGE0 317 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 CLDND2Q8NHS1 167 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 CCL17Q92583 94 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 MSI2Q96DH6 328 aaKnown RBP12.58□□□□□ -0.4
ATG4D-207ENST00000587256 CENPNQ96H22 339 aaPredicted RBP12.58□□□□□ -0.4
ATG4D-207ENST00000587256 KCNJ15Q99712 375 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 MARCH7Q9H992 704 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 TREM2Q9NZC2 230 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 KCNS2Q9ULS6 477 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 OAZ3Q9UMX2 235 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 N6AMT1Q9Y5N5 214 aa12.58□□□□□ -0.4
ATG4D-207ENST00000587256 CRLF1O75462 422 aa12.57□□□□□ -0.4
ATG4D-207ENST00000587256 SLC2A1P11166 492 aa12.57□□□□□ -0.4
ATG4D-207ENST00000587256 CX3CR1P49238 355 aa12.57□□□□□ -0.4
ATG4D-207ENST00000587256 SLC3A1Q07837 685 aa12.57□□□□□ -0.4
ATG4D-207ENST00000587256 APOFQ13790 326 aa12.57□□□□□ -0.4
ATG4D-207ENST00000587256 SNAI3Q3KNW1 292 aa12.57□□□□□ -0.4
ATG4D-207ENST00000587256 SLC35D3Q5M8T2 416 aa12.57□□□□□ -0.4
ATG4D-207ENST00000587256 LCN1P1Q5VSP4 162 aa12.57□□□□□ -0.4
ATG4D-207ENST00000587256 KDM4DQ6B0I6 523 aa12.57□□□□□ -0.4
ATG4D-207ENST00000587256 TIGD4Q8IY51 512 aa12.57□□□□□ -0.4
ATG4D-207ENST00000587256 OR2AE1Q8NHA4 323 aa12.57□□□□□ -0.4
ATG4D-207ENST00000587256 SPRYD4Q8WW59 207 aaPredicted RBP12.57□□□□□ -0.4
ATG4D-207ENST00000587256 RAB1CQ92928 201 aa12.57□□□□□ -0.4
ATG4D-207ENST00000587256 SOX7Q9BT81 388 aa12.57□□□□□ -0.4
ATG4D-207ENST00000587256 ABHD6Q9BV23 337 aa12.57□□□□□ -0.4
ATG4D-207ENST00000587256 ANK3Q12955 4377 aaKnown RBP12.57□□□□□ -0.4
ATG4D-207ENST00000587256 ISPDA4D126 451 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 IQCF6A8MYZ5 107 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 M0R129 80 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 TBX1O43435 398 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 LMX1BO60663 402 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 TGFAP01135 160 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 ANXA2P07355 339 aaKnown RBP12.56□□□□□ -0.4
ATG4D-207ENST00000587256 LYNP07948 512 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 SPRNQ5BIV9 151 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 GLYATL3Q5SZD4 288 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 SLX4IPQ5VYV7 408 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 ZFP1Q6P2D0 407 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 PEG10Q86TG7 708 aaKnown RBP12.56□□□□□ -0.4
ATG4D-207ENST00000587256 ZNF454Q8N9F8 522 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 OR13G1Q8NGZ3 307 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 OTOSQ8NHW6 89 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 RNF133Q8WVZ7 376 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 ITLN1Q8WWA0 313 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 OR2V2Q96R30 315 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 AMELYQ99218 206 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 CIB1Q99828 191 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 TOR3AQ9H497 397 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 RIBC2Q9H4K1 309 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 DNAJC27Q9NZQ0 273 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 IL19Q9UHD0 177 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 WIPI2Q9Y4P8 454 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 JMJD1CQ15652 2540 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 ABCA2Q9BZC7 2435 aa12.56□□□□□ -0.4
ATG4D-207ENST00000587256 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.55□□□□□ -0.45e-7■■■■□ 20.9
ATG4D-207ENST00000587256 WNT9BO14905 357 aa12.55□□□□□ -0.4
ATG4D-207ENST00000587256 PRKYO43930 277 aa12.55□□□□□ -0.4
ATG4D-207ENST00000587256 APOC1P02654 83 aa12.55□□□□□ -0.4
ATG4D-207ENST00000587256 MRPL3P09001 348 aaKnown RBP12.55□□□□□ -0.4
ATG4D-207ENST00000587256 H2BFMP0C1H6 154 aa12.55□□□□□ -0.4
ATG4D-207ENST00000587256 SLC2A5P22732 501 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms